BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26c21
(289 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075548-1|AAL68355.1| 73|Drosophila melanogaster RH49308p pro... 89 1e-18
AY061306-1|AAL28854.1| 743|Drosophila melanogaster LD22256p pro... 57 4e-09
AJ635208-1|CAG25590.1| 1153|Drosophila melanogaster CAP-G protei... 57 4e-09
AE013599-1638|AAS64861.1| 743|Drosophila melanogaster CG17054-P... 57 4e-09
AE013599-1634|AAF58425.4| 1153|Drosophila melanogaster CG17054-P... 57 4e-09
BT006018-1|AAO74701.1| 76|Drosophila melanogaster GM07658p pro... 26 9.0
>AY075548-1|AAL68355.1| 73|Drosophila melanogaster RH49308p
protein.
Length = 73
Score = 88.6 bits (210), Expect = 1e-18
Identities = 36/69 (52%), Positives = 52/69 (75%)
Frame = +2
Query: 20 MWYEILPSFFIITAAVGLPGWGLYHIHNLTLGNHYRRSLTDRWSRALYQRDMRLTGNPYE 199
MW+EILP IIT + +P + +Y + L +GN +RR++ +R+SR +YQRD RLT NPY+
Sbjct: 1 MWFEILPGAVIITTLLSVPIYAMYGLDKLMIGNAFRRNMNERFSRVMYQRDFRLTDNPYK 60
Query: 200 VNGLEAIPD 226
+NGL+AIPD
Sbjct: 61 MNGLDAIPD 69
>AY061306-1|AAL28854.1| 743|Drosophila melanogaster LD22256p
protein.
Length = 743
Score = 56.8 bits (131), Expect = 4e-09
Identities = 22/35 (62%), Positives = 31/35 (88%)
Frame = +2
Query: 122 YRRSLTDRWSRALYQRDMRLTGNPYEVNGLEAIPD 226
+RR++ +R+SR +YQRD RLT NPY++NGL+AIPD
Sbjct: 705 FRRNMDERFSRVMYQRDFRLTDNPYKMNGLDAIPD 739
>AJ635208-1|CAG25590.1| 1153|Drosophila melanogaster CAP-G protein
protein.
Length = 1153
Score = 56.8 bits (131), Expect = 4e-09
Identities = 22/35 (62%), Positives = 31/35 (88%)
Frame = +2
Query: 122 YRRSLTDRWSRALYQRDMRLTGNPYEVNGLEAIPD 226
+RR++ +R+SR +YQRD RLT NPY++NGL+AIPD
Sbjct: 1115 FRRNMDERFSRVMYQRDFRLTDNPYKMNGLDAIPD 1149
>AE013599-1638|AAS64861.1| 743|Drosophila melanogaster CG17054-PE,
isoform E protein.
Length = 743
Score = 56.8 bits (131), Expect = 4e-09
Identities = 22/35 (62%), Positives = 31/35 (88%)
Frame = +2
Query: 122 YRRSLTDRWSRALYQRDMRLTGNPYEVNGLEAIPD 226
+RR++ +R+SR +YQRD RLT NPY++NGL+AIPD
Sbjct: 705 FRRNMDERFSRVMYQRDFRLTDNPYKMNGLDAIPD 739
>AE013599-1634|AAF58425.4| 1153|Drosophila melanogaster CG17054-PA,
isoform A protein.
Length = 1153
Score = 56.8 bits (131), Expect = 4e-09
Identities = 22/35 (62%), Positives = 31/35 (88%)
Frame = +2
Query: 122 YRRSLTDRWSRALYQRDMRLTGNPYEVNGLEAIPD 226
+RR++ +R+SR +YQRD RLT NPY++NGL+AIPD
Sbjct: 1115 FRRNMDERFSRVMYQRDFRLTDNPYKMNGLDAIPD 1149
>BT006018-1|AAO74701.1| 76|Drosophila melanogaster GM07658p
protein.
Length = 76
Score = 25.8 bits (54), Expect = 9.0
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -3
Query: 212 PSHSLHKDYQ*ASYPSGT--THDSIYQ*ASVYNDCLKSDYVYDKDPSPVDQQ 63
P L+ + +Y SGT T + + Q ++ C K Y++D P+ +DQQ
Sbjct: 25 PERHLYAFFTFKNYFSGTLLTKNVLNQKDNLLGWCQKLVYLFDPVPASLDQQ 76
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,838,349
Number of Sequences: 53049
Number of extensions: 207485
Number of successful extensions: 351
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 351
length of database: 24,988,368
effective HSP length: 72
effective length of database: 21,168,840
effective search space used: 486883320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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