Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26c19
(715 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0577 + 4280590-4281225,4281749-4282102,4282214-4282412,428... 34 0.097
08_02_0851 - 21866088-21866210,21866311-21866413,21866531-218667... 32 0.52
02_05_0403 - 28696043-28696153,28696245-28696347,28696443-286965... 31 0.69
07_01_0344 - 2490700-2493249 30 1.6
03_01_0202 + 1605703-1606402,1606681-1606824,1606911-1607063,160... 30 1.6
02_03_0300 + 17454622-17455402,17455535-17456977,17457015-174573... 30 1.6
03_02_0732 - 10794173-10795069,10795301-10795891,10797032-10797268 29 3.7
02_02_0436 - 10212611-10212984,10213213-10213642,10213660-10215459 29 4.8
01_05_0762 + 24990915-24990970,24991076-24991592,24991676-249917... 29 4.8
05_05_0034 - 21741148-21741275,21741890-21741928,21742007-217421... 28 6.4
10_08_0491 - 18283404-18283482,18283590-18283658,18283767-182838... 28 8.5
08_02_1237 + 25475219-25475916,25476127-25476320,25476407-254773... 28 8.5
02_03_0307 + 17546263-17546299,17546522-17548018,17548859-175489... 28 8.5
01_01_0827 + 6443319-6446085,6446317-6446407,6446502-6448017,644... 28 8.5
>02_01_0577 +
4280590-4281225,4281749-4282102,4282214-4282412,
4284991-4285204,4285299-4285401,4285481-4285639
Length = 554
Score = 34.3 bits (75), Expect = 0.097
Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Frame = +3
Query: 9 EILTAKGVVPDAKERDRLILAEIAFHCLKKRPNATNMINGSTGESFTNEQILKRAVSIAR 188
E++ + +PD + + + L E F + + +I+G TGES+T ++ + A
Sbjct: 8 EVVVFRSKLPDIEIDNSMTLQEYCFARMAEVGARPCLIDGQTGESYTYAEVESASRRAAA 67
Query: 189 SIMARGAA-GNNIMVVMRNHQNLFSIYWSLLLSGALPFMMDPSTTVYEL 332
+ G G+ +M ++RN + GA +P T +E+
Sbjct: 68 GLRRMGVGKGDVVMSLLRNCPEFAFSFLGAARLGAATTTANPFYTPHEV 116
>08_02_0851 -
21866088-21866210,21866311-21866413,21866531-21866744,
21866877-21867075,21867171-21868151
Length = 539
Score = 31.9 bits (69), Expect = 0.52
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Frame = +3
Query: 3 LNEILTAKGVVPDAKERDRLILAEIAFHCLKKRPNATNMINGSTGE--SFTNEQILKRAV 176
L E + +PD D L L + F L R + +I+G+TGE SF + L R V
Sbjct: 4 LPEQFVFRSRLPDIAIPDHLPLHDYVFERLADRRDRACLIDGATGETLSFGDVDALSRRV 63
Query: 177 SIARSIMARGAAGNNIMVVMRNHQNLFSIYWSLLLSGALPFMMDPSTTVYEL 332
+ S + G+ +M+++ N + + GA+ +P T E+
Sbjct: 64 AAGLSSIG-VCHGSTVMLLLPNSVEFAVAFLASSRLGAVTTTANPLHTPPEI 114
>02_05_0403 -
28696043-28696153,28696245-28696347,28696443-28696510,
28696582-28696727,28698038-28699124
Length = 504
Score = 31.5 bits (68), Expect = 0.69
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +3
Query: 33 VPDAKERDRLILAEIAFHCLKKRPNATNMINGSTGESFT--NEQILKRAVSIARSIMARG 206
+PD L L E F + P+A +I +TG ++T ++L R + A + G
Sbjct: 32 LPDIDIPSHLPLHEYCFARAAELPDAPCLIAAATGRTYTFAETRLLCRRAAAALHRLGVG 91
Query: 207 AAGNNIMVVMRNHQNLFSIYWSLLLSGALPFMMDPSTTVYEL 332
G+ +MV+++N +++ GA+ +P T E+
Sbjct: 92 -HGDRVMVLLQNCVEFAVAFFAASFLGAVTTAANPFCTPQEI 132
>07_01_0344 - 2490700-2493249
Length = 849
Score = 30.3 bits (65), Expect = 1.6
Identities = 35/146 (23%), Positives = 65/146 (44%)
Frame = +3
Query: 3 LNEILTAKGVVPDAKERDRLILAEIAFHCLKKRPNATNMINGSTGESFTNEQILKRAVSI 182
L E+L A+ V+ A RD++ LAE A K++ T +I+ ++T E I K +
Sbjct: 708 LFEVLCARPVINPALPRDQINLAEWALKWQKQKLLET-IIDPRLEGNYTLESIRKFSEIA 766
Query: 183 ARSIMARGAAGNNIMVVMRNHQNLFSIYWSLLLSGALPFMMDPSTTVYELGYFLQLLEPS 362
+ + G + +I V+ + ++ ++ LL S + P + + L +E
Sbjct: 767 EKCLADEGRSRPSIGEVLWHLESALQLHQGLLQSANTDDLSQPELKLSDASCNLGCIEEV 826
Query: 363 IVFCDREYYNDIKKSLDDLPDLKTEV 440
C R D+ ++ D+K EV
Sbjct: 827 EESC-RAGSQDVN---EEYVDVKIEV 848
>03_01_0202 +
1605703-1606402,1606681-1606824,1606911-1607063,
1607236-1607351,1607737-1607904,1607990-1608214,
1608711-1608833
Length = 542
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 595 TTYLCTENNGNCQFVCE 645
TTYLCTE N C++ C+
Sbjct: 92 TTYLCTEINTGCEYACK 108
>02_03_0300 + 17454622-17455402,17455535-17456977,17457015-17457317,
17458429-17458519,17458623-17459757,17459998-17460077,
17460449-17460533,17460614-17460705,17461079-17461147,
17461227-17461263,17461351-17461433,17461695-17461840,
17461868-17462138,17462245-17462281,17462428-17462721
Length = 1648
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -2
Query: 111 WRLVVSLDSEKQFLLISIYPALLHLERHLWPLIFHL 4
W + L Q L+ +YP L H+++++WP + L
Sbjct: 1320 WVPLQPLPESLQLHLLELYPLLEHIQKYIWPRLCKL 1355
>03_02_0732 - 10794173-10795069,10795301-10795891,10797032-10797268
Length = 574
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/111 (18%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +3
Query: 102 PNATNMINGSTGESFTNEQILKRAVSIARSIMARGAA-GNNIMVVMRNHQNLFSIYWSLL 278
P+ +++G +T + +R +A ++ R G + V+ N L+ ++ +
Sbjct: 41 PDRAAVVHGPV--RYTWAETYRRCRRLASALAQRSVGPGCTVAVIAPNVPALYEAHFGVP 98
Query: 279 LSGALPFMMDPSTTVYELGYFLQLLEPSIVFCDREYYNDIKKSLDDLPDLK 431
+SGA+ ++ + + L +V D+E++ ++SL L + K
Sbjct: 99 MSGAVVNCVNIRLNAETIAFLLDHSVAEVVMVDQEFFTLAEESLKILAEKK 149
>02_02_0436 - 10212611-10212984,10213213-10213642,10213660-10215459
Length = 867
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +3
Query: 3 LNEILTAKGVVPDAKERDRLILAEIAFHCL----KKRPNATNMINGSTGES 143
L +IL + + P +E+D ++L +AF CL K RP + T S
Sbjct: 790 LKDILDQRIMAPTTEEKDIILLVLVAFACLQICPKSRPTMQQVCQAMTTRS 840
>01_05_0762 +
24990915-24990970,24991076-24991592,24991676-24991753,
24993678-24993743,24994819-24994943,24995414-24995612,
24995909-24996137,24996259-24996425,24996526-24996735,
24997245-24997355,24997436-24997612,24997826-24998284,
24998676-24998966
Length = 894
Score = 28.7 bits (61), Expect = 4.8
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Frame = +3
Query: 57 RLILAEIAFHCLKKRPNATNMINGST---GESFTNEQILKRAVSIARSIMARGAAGNNIM 227
RL L C KRP T M G+T G S T++ + RA+ R + A ++
Sbjct: 551 RLHLLTAVMKCFFKRPPETQMALGATLTAGLSDTHQDVHDRALFYYRLLQYDPAVAERVV 610
Query: 228 VVMRNHQNLFSIYWSLLLSGALPFMMDPSTTVYELGYFLQLLEPSIVFCDREYYNDIKKS 407
+ ++F+ S + + + + VY+ +PS +F D+E+ + S
Sbjct: 611 NPPKQAVSVFADTQSSEIKDRIFDEFNSLSVVYQ--------KPSYMFTDKEHRGPFEYS 662
Query: 408 LDDLPDL 428
+DL +L
Sbjct: 663 -EDLTNL 668
>05_05_0034 - 21741148-21741275,21741890-21741928,21742007-21742121,
21742227-21742292,21743213-21743371,21743573-21743609,
21743757-21744194,21744735-21744817,21744920-21744956,
21745146-21745214,21745316-21745407,21745481-21745565,
21745903-21745982,21746327-21746724,21746813-21747717,
21747825-21747915,21748617-21750680,21750681-21750749,
21750850-21751273,21751644-21751763
Length = 1832
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -2
Query: 111 WRLVVSLDSEKQFLLISIYPALLHLERHLWPLIFHL 4
W + L Q L+ +YP L ++++LWP + L
Sbjct: 1426 WVPIQPLPESLQLHLLELYPVLETIQKYLWPRLCKL 1461
>10_08_0491 -
18283404-18283482,18283590-18283658,18283767-18283883,
18283953-18284068,18284149-18284223,18284248-18284430,
18284530-18284591,18284668-18285606,18285723-18285846,
18285917-18286060,18286151-18286225,18286359-18286382,
18287025-18287095,18287305-18287407,18287555-18287781,
18287910-18288027,18288220-18288311,18288793-18288874
Length = 899
Score = 27.9 bits (59), Expect = 8.5
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 162 LKRAVSIARSIMARGAAGNNIMVVMRNHQNLFSIYWSLLLSGALPFMMDPSTTVYELGYF 341
L+R S+AR A ++I +M NHQ S L + S +Y + YF
Sbjct: 687 LRRRSSVAREQSASAGDEDDIADLMENHQEFIHAVKSRLTK----LEVITSMVIYSICYF 742
Query: 342 LQLLEPSIVF-CDREYYNDIKKSLD 413
++ ++V+ C + ND+K S+D
Sbjct: 743 -EIPRVTVVYRC--WHNNDVKGSID 764
>08_02_1237 + 25475219-25475916,25476127-25476320,25476407-25477302,
25477416-25477490,25477582-25477689,25477780-25477897,
25478007-25478142,25478228-25478372,25478460-25479080,
25479166-25479597
Length = 1140
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 42 AKERDRLILAEIAFHCLKKRPNATNMINGSTGESFTNEQILKRAVSIARSIMAR 203
+ ERD L + L KR A++ ++ T E + +L RAV S MAR
Sbjct: 891 SSERDWCSLTKTLLEILAKRSLASDELSQETLEMLSEIHLLNRAVKRKSSHMAR 944
>02_03_0307 +
17546263-17546299,17546522-17548018,17548859-17548949,
17549054-17549621,17550591-17550670,17550993-17551077,
17551172-17551263,17551355-17551423,17551587-17551655,
17552217-17552510,17552761-17552797,17552883-17552972,
17553520-17553585,17553704-17553818,17553902-17553940,
17554519-17554700
Length = 1136
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -2
Query: 111 WRLVVSLDSEKQFLLISIYPALLHLERHLWP 19
W + L +F L+ +YP + ++++LWP
Sbjct: 800 WVKLQPLPFSAEFHLVGLYPIMRDVQKYLWP 830
>01_01_0827 + 6443319-6446085,6446317-6446407,6446502-6448017,
6448164-6448243,6449045-6449129,6449221-6449312,
6449388-6449456,6449544-6449580,6449662-6449744,
6450427-6450873,6450978-6451014,6451101-6451158,
6451243-6451382,6451610-6451675,6451794-6451908,
6453261-6453299,6453482-6453543
Length = 1927
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -2
Query: 111 WRLVVSLDSEKQFLLISIYPALLHLERHLWPLIFHL 4
W + L Q L+ +YP L +++++LWP + L
Sbjct: 1527 WVPLQPLPESLQLHLLEMYPMLENIQKYLWPRLCKL 1562
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,521,708
Number of Sequences: 37544
Number of extensions: 323306
Number of successful extensions: 793
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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