Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26c19
         (715 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    25   2.4  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            24   4.1  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   9.5  

>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 601 YLCTENNGNCQFVC 642
           +LC   NG C ++C
Sbjct: 2   FLCAHKNGGCSYIC 15


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +3

Query: 42  AKERDRLILAEIAFHCLKKRPNATNMINGSTGESFTNEQIL 164
           A+ R  LI A  +       PNA    + S+ ++F+NE +L
Sbjct: 656 AEMRTVLIFAPSSNQSSSSTPNAEQSPSASSKDTFSNEYVL 696


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 330  LGYFLQLLEPSIVFCDREYYNDIKKSLDDLPDLKTEV 440
            +G  L   E      + EYYND+++ L  L   +T V
Sbjct: 1397 IGIPLSPTETEATSSEHEYYNDLQRELIPLHRNETTV 1433


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,735
Number of Sequences: 2352
Number of extensions: 14535
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)