Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26c19
         (715 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66522-5|CAA91405.1| 1149|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z93390-4|CAJ76953.1|  347|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z93390-3|CAB07676.1|  680|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z66522-5|CAA91405.1| 1149|Caenorhabditis elegans Hypothetical
           protein F14E5.2a protein.
          Length = 1149

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +3

Query: 348 LLEPSIVFCDREYYNDIKKSLDDLPDLKTEVYICNEDDLLEDFI 479
           L +  + F D+E+  D    L    + + ++Y CN+ D  ED I
Sbjct: 757 LQQEQVEFDDKEHMADADPKLSQKCEQEIKMYKCNQADTFEDTI 800


>Z93390-4|CAJ76953.1|  347|Caenorhabditis elegans Hypothetical
           protein T23B5.1b protein.
          Length = 347

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
 Frame = +3

Query: 255 FSIYWSLLLSGALPFMMDPSTT-VYELGYFLQLLEPSIVFCDREY---YNDIKKSLDDLP 422
           FS++++  L+G    ++D S +  ++LG  +   EP +V CD+EY   +  +   LD   
Sbjct: 35  FSVHFTSDLTGHGDNIIDSSKSRAWDLG-IIPFKEPCLVKCDKEYEGSWKLLNNRLDVYN 93

Query: 423 DLKTEVYICNEDDL 464
           D   E    +ED L
Sbjct: 94  DFYDENLQKHEDSL 107


>Z93390-3|CAB07676.1|  680|Caenorhabditis elegans Hypothetical
           protein T23B5.1a protein.
          Length = 680

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
 Frame = +3

Query: 255 FSIYWSLLLSGALPFMMDPSTT-VYELGYFLQLLEPSIVFCDREY---YNDIKKSLDDLP 422
           FS++++  L+G    ++D S +  ++LG  +   EP +V CD+EY   +  +   LD   
Sbjct: 368 FSVHFTSDLTGHGDNIIDSSKSRAWDLG-IIPFKEPCLVKCDKEYEGSWKLLNNRLDVYN 426

Query: 423 DLKTEVYICNEDDL 464
           D   E    +ED L
Sbjct: 427 DFYDENLQKHEDSL 440


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,310,963
Number of Sequences: 27780
Number of extensions: 322918
Number of successful extensions: 854
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)