Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26c14
(671 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002196-9|AAV34797.1| 475|Caenorhabditis elegans Hypothetical ... 35 0.046
AF002196-8|AAB53976.2| 586|Caenorhabditis elegans Hypothetical ... 35 0.046
AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopepti... 35 0.061
AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide ... 35 0.061
U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical pr... 33 0.18
U28735-4|AAF99953.1| 488|Caenorhabditis elegans Hypothetical pr... 32 0.43
U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical pr... 31 0.75
AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical... 31 0.99
AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical ... 31 0.99
AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 30 1.3
AC025726-24|AAK73926.2| 447|Caenorhabditis elegans Hypothetical... 30 1.3
AF047657-7|AAK18943.1| 424|Caenorhabditis elegans Hypothetical ... 29 3.0
Z93391-2|CAB07681.1| 490|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical pr... 27 9.2
U40061-7|AAA81153.1| 357|Caenorhabditis elegans Unidentified vi... 27 9.2
AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical ... 27 9.2
AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein. 27 9.2
>AF002196-9|AAV34797.1| 475|Caenorhabditis elegans Hypothetical
protein C09D4.1b protein.
Length = 475
Score = 35.1 bits (77), Expect = 0.046
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 505 WIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIG-WILVI 639
W I +L L IP+A+L DK+G + ++LLGA+ +G WI ++
Sbjct: 80 WTSMIYMLTYILFFIPAAWLLDKWGLRLSVLLGALGNCVGAWIKLL 125
>AF002196-8|AAB53976.2| 586|Caenorhabditis elegans Hypothetical
protein C09D4.1a protein.
Length = 586
Score = 35.1 bits (77), Expect = 0.046
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 505 WIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIG-WILVI 639
W I +L L IP+A+L DK+G + ++LLGA+ +G WI ++
Sbjct: 191 WTSMIYMLTYILFFIPAAWLLDKWGLRLSVLLGALGNCVGAWIKLL 236
>AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopeptide
symporter OPT-3 protein.
Length = 701
Score = 34.7 bits (76), Expect = 0.061
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +1
Query: 427 YGWPSPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADK-FGRKTTLLLG 603
YG + +YL +E P+ A ++I + + LTP+ + +AD FGR +L G
Sbjct: 32 YGMKTILFIYLITEHEFSPSKA---TFIYHLFTCIAYLTPLIGSIMADSVFGRFKVILYG 88
Query: 604 AIPFIIGWILVIVAKSLPML 663
+ +++G +L+ + ++P L
Sbjct: 89 SSIYVVGHVLLSLG-AVPFL 107
>AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide
transporter protein 3 protein.
Length = 701
Score = 34.7 bits (76), Expect = 0.061
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +1
Query: 427 YGWPSPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADK-FGRKTTLLLG 603
YG + +YL +E P+ A ++I + + LTP+ + +AD FGR +L G
Sbjct: 32 YGMKTILFIYLITEHEFSPSKA---TFIYHLFTCIAYLTPLIGSIMADSVFGRFKVILYG 88
Query: 604 AIPFIIGWILVIVAKSLPML 663
+ +++G +L+ + ++P L
Sbjct: 89 SSIYVVGHVLLSLG-AVPFL 107
>U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical
protein F23F12.3 protein.
Length = 522
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 436 PSPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLG-AIP 612
P+P ++ + T AY +WI +I + + + + +L D FGRK +G +I
Sbjct: 75 PAPFHSMVQDFKMFCGTKAYDSAWIATIQFIGALVGALVYGHLGDHFGRKPVSFVGISIG 134
Query: 613 FIIG 624
I G
Sbjct: 135 IIFG 138
>U28735-4|AAF99953.1| 488|Caenorhabditis elegans Hypothetical
protein F48E3.2 protein.
Length = 488
Score = 31.9 bits (69), Expect = 0.43
Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 463 SEESSIPTTAYQGSW--IVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILV 636
+E ++ + ++ +W +++I + A + SA +AD+ GRK TL LG ++ ++
Sbjct: 46 NEPYTLSNSEFEWAWSAMLAIYFIGFAAGSVISAGVADRIGRKWTLFLGTCGSLLSSLIA 105
Query: 637 IVAKSLPM 660
+ A L M
Sbjct: 106 LFAIILKM 113
>U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical
protein F23F12.13 protein.
Length = 528
Score = 31.1 bits (67), Expect = 0.75
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 484 TTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLG 603
T AY +W+ +I + + I +L D FGRK G
Sbjct: 91 TKAYDAAWVATIQFIGVLIGAITYGHLGDHFGRKPVSFFG 130
>AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical
protein Y51A2D.18 protein.
Length = 550
Score = 30.7 bits (66), Expect = 0.99
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = +1
Query: 562 LADKFGRKTTLLLGAIPFIIGWILVIVAKSL 654
++D FGRK + ++ +IGW++V+ +++L
Sbjct: 149 ISDSFGRKIGSQVASLGMLIGWLIVVQSRNL 179
>AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical
protein R09B5.11 protein.
Length = 516
Score = 30.7 bits (66), Expect = 0.99
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 553 SAYLADKFGRKTTLLLGAIPFIIGWILVIVAK 648
S +LADKFGRK+TLL I ++ + + +K
Sbjct: 118 SGFLADKFGRKSTLLYNNILALLAAVCLSTSK 149
>AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical
protein Y51A2D.5 protein.
Length = 613
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/47 (23%), Positives = 23/47 (48%)
Frame = +1
Query: 505 WIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVA 645
WI I+ +C+ + P + +K GR+ L ++ +L+ V+
Sbjct: 320 WISVILSICNLIGPFAPMFFIEKLGRRKLFLFSCAGVVVSLVLIGVS 366
>AC025726-24|AAK73926.2| 447|Caenorhabditis elegans Hypothetical
protein Y71G12B.25 protein.
Length = 447
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +1
Query: 433 WPSPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIP 612
W + L +L+ + + T G +I + LC+A + + LAD G ++ LL A+
Sbjct: 26 WTTTLLSFLQWDTEEVMTITDLG-YIQAFGSLCNAFGALAAGQLADTLGAQSMFLLSAVF 84
Query: 613 FIIGWILVIVAKS 651
I + + +A+S
Sbjct: 85 TAIYYSGISLARS 97
>AF047657-7|AAK18943.1| 424|Caenorhabditis elegans Hypothetical
protein F37B4.7 protein.
Length = 424
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +1
Query: 442 PTLLYLESEESSIPTTAYQ--GSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPF 615
PT Y+ + ++ + Q S + I +T IP+ L D F K L+ A +
Sbjct: 21 PTEPYMYEYQHTVLNMSEQTLNSQVYPIWTYSYLITLIPAFLLTDVFLYKPLLVFEAFSY 80
Query: 616 IIGWILVIVAKSL 654
+ W++ + KS+
Sbjct: 81 FLCWVIFVFGKSV 93
>Z93391-2|CAB07681.1| 490|Caenorhabditis elegans Hypothetical
protein W04G5.4 protein.
Length = 490
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 312 NVNIFILIQQNGSK-NSFTLEGIWNSIMCDPHY 407
++ IF +NGS SF++E WN + PH+
Sbjct: 193 DIKIFKTEMKNGSNVESFSVEFYWNPLSHQPHF 225
>Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical protein
K04B12.1 protein.
Length = 1764
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 378 WNSI-MCDPHYCNSRYLLRLAVSYSTVS*IRRKFNTNNCLPRIMDSLNNDTLLGS 539
W+S+ C P Y +S+Y S T++ ++ N +N LP+ + + LL S
Sbjct: 1492 WSSLDRCSPIYSSSKYYHLTNPSSGTMTFKKKSSNDSNLLPKSIPEVYLTRLLTS 1546
>Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical
protein M01F1.5 protein.
Length = 604
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = +1
Query: 430 GWPSPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAI 609
G S +LY+ + P + IVSI +A+ + S +D GRK ++ ++
Sbjct: 47 GIVSAAMLYVPNASGIKPLDSVWQEIIVSITPGVAAIGSLCSGPGSDFLGRKKIIIGASV 106
Query: 610 PFIIGWILVIVA 645
F IG I+ A
Sbjct: 107 TFTIGAIICAAA 118
>U40061-7|AAA81153.1| 357|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 7 protein.
Length = 357
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +1
Query: 508 IVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAKSLP 657
+VS I A+ + ++ + GRK +++G I +IG +L ++ S+P
Sbjct: 105 LVSSRIYGLAIGCFVAVLMSHRHGRKLPVVVGTILDVIGVVLTLLITSVP 154
>AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical
protein Y51A2D.4 protein.
Length = 606
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 445 TLLYLESE--ESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFI 618
T+LY ++ SS + + WI ++ LC+ + P L +K GR+ L +
Sbjct: 297 TILYYTADIIRSSGISNNHTTIWISVLLSLCNFIGPFVPMSLIEKVGRRIIFLFSCGLVV 356
Query: 619 IGWILVIVA 645
+ + + VA
Sbjct: 357 LSLVFIGVA 365
>AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.
Length = 1766
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 378 WNSI-MCDPHYCNSRYLLRLAVSYSTVS*IRRKFNTNNCLPRIMDSLNNDTLLGS 539
W+S+ C P Y +S+Y S T++ ++ N +N LP+ + + LL S
Sbjct: 1494 WSSLDRCSPIYSSSKYYHLTNPSSGTMTFKKKSSNDSNLLPKSIPEVYLTRLLTS 1548
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,956,712
Number of Sequences: 27780
Number of extensions: 243986
Number of successful extensions: 635
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 635
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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