Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26c08
         (558 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008905-1|AAH08905.1|  483|Homo sapiens coiled-coil domain cont...    34   0.39 
AK075387-1|BAC11587.1|  483|Homo sapiens protein ( Homo sapiens ...    34   0.39 
AK027844-1|BAB55407.1|  483|Homo sapiens protein ( Homo sapiens ...    34   0.39 
AK027786-1|BAB55367.1|  480|Homo sapiens protein ( Homo sapiens ...    34   0.39 
AF226054-1|AAF86954.1|  483|Homo sapiens GK001 protein.                34   0.39 

>BC008905-1|AAH08905.1|  483|Homo sapiens coiled-coil domain
           containing 47 protein.
          Length = 483

 Score = 33.9 bits (74), Expect = 0.39
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = +1

Query: 388 DPEEFEGFQET--TPRTMEQPKITISKVPITARPRWDAYWLE 507
           D EEFEG+++   T  +  +  ITI  VP   +  W++Y+LE
Sbjct: 98  DDEEFEGYEDKPDTSSSKNKDPITIVDVPAHLQNSWESYYLE 139


>AK075387-1|BAC11587.1|  483|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0077 fis, clone NT2RP2003902, highly similar to
           GK001 protein. ).
          Length = 483

 Score = 33.9 bits (74), Expect = 0.39
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = +1

Query: 388 DPEEFEGFQET--TPRTMEQPKITISKVPITARPRWDAYWLE 507
           D EEFEG+++   T  +  +  ITI  VP   +  W++Y+LE
Sbjct: 98  DDEEFEGYEDKPDTSSSKNKDPITIVDVPAHLQNSWESYYLE 139


>AK027844-1|BAB55407.1|  483|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14938 fis, clone PLACE1010622, weakly similar to
           TROPONIN T, CARDIAC MUSCLE ISOFORMS. ).
          Length = 483

 Score = 33.9 bits (74), Expect = 0.39
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = +1

Query: 388 DPEEFEGFQET--TPRTMEQPKITISKVPITARPRWDAYWLE 507
           D EEFEG+++   T  +  +  ITI  VP   +  W++Y+LE
Sbjct: 98  DDEEFEGYEDKPDTSSSKNKDPITIVDVPAHLQNSWESYYLE 139


>AK027786-1|BAB55367.1|  480|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14880 fis, clone PLACE1003369. ).
          Length = 480

 Score = 33.9 bits (74), Expect = 0.39
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = +1

Query: 388 DPEEFEGFQET--TPRTMEQPKITISKVPITARPRWDAYWLE 507
           D EEFEG+++   T  +  +  ITI  VP   +  W++Y+LE
Sbjct: 98  DDEEFEGYEDKPDTSSSKNKDPITIVDVPAHLQNSWESYYLE 139


>AF226054-1|AAF86954.1|  483|Homo sapiens GK001 protein.
          Length = 483

 Score = 33.9 bits (74), Expect = 0.39
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = +1

Query: 388 DPEEFEGFQET--TPRTMEQPKITISKVPITARPRWDAYWLE 507
           D EEFEG+++   T  +  +  ITI  VP   +  W++Y+LE
Sbjct: 98  DDEEFEGYEDKPDTSSSKNKDPITIVDVPAHLQNSWESYYLE 139


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,695,595
Number of Sequences: 237096
Number of extensions: 1192095
Number of successful extensions: 2588
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2583
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)