Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26c08
         (558 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83244-6|CAD18877.1|  502|Caenorhabditis elegans Hypothetical pr...    31   0.74 
Z83244-5|CAB54315.1|  568|Caenorhabditis elegans Hypothetical pr...    31   0.74 
Z83244-4|CAB54314.1|  562|Caenorhabditis elegans Hypothetical pr...    31   0.74 
U13019-12|AAC24448.1|  316|Caenorhabditis elegans Serpentine rec...    29   2.3  
U23168-9|AAC38805.1|  196|Caenorhabditis elegans Hypothetical pr...    29   3.0  

>Z83244-6|CAD18877.1|  502|Caenorhabditis elegans Hypothetical
           protein W06F12.2c protein.
          Length = 502

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = -3

Query: 490 PSEVEPL*EP*K**SLVVPLYEEWFPGTLQTPQGLGNAQIHCPHPLILFRLQFQLQPQI 314
           P + +PL +P      V P Y     G  QTP  L   QI+ P+P+    +QF +QP++
Sbjct: 215 PMKYKPLAQPYP----VFPSYSR--AGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKV 267


>Z83244-5|CAB54315.1|  568|Caenorhabditis elegans Hypothetical
           protein W06F12.2b protein.
          Length = 568

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = -3

Query: 490 PSEVEPL*EP*K**SLVVPLYEEWFPGTLQTPQGLGNAQIHCPHPLILFRLQFQLQPQI 314
           P + +PL +P      V P Y     G  QTP  L   QI+ P+P+    +QF +QP++
Sbjct: 215 PMKYKPLAQPYP----VFPSYSR--AGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKV 267


>Z83244-4|CAB54314.1|  562|Caenorhabditis elegans Hypothetical
           protein W06F12.2a protein.
          Length = 562

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = -3

Query: 490 PSEVEPL*EP*K**SLVVPLYEEWFPGTLQTPQGLGNAQIHCPHPLILFRLQFQLQPQI 314
           P + +PL +P      V P Y     G  QTP  L   QI+ P+P+    +QF +QP++
Sbjct: 209 PMKYKPLAQPYP----VFPSYSR--AGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKV 261


>U13019-12|AAC24448.1|  316|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 8 protein.
          Length = 316

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
 Frame = -2

Query: 134 NVIRILYLYLVPCFFNFNHQFINKRLLIF----SYINYFK 27
           N  RIL L L+  FF   +  I+K++LIF     YINY K
Sbjct: 146 NFSRILILNLIAPFFFIWNTIISKKVLIFYFGGFYINYLK 185


>U23168-9|AAC38805.1|  196|Caenorhabditis elegans Hypothetical
           protein B0228.1 protein.
          Length = 196

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +1

Query: 433 MEQPKITISKVPITARPR 486
           ME   +TISKVPI+ RPR
Sbjct: 1   MENASVTISKVPISHRPR 18


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,672,862
Number of Sequences: 27780
Number of extensions: 187773
Number of successful extensions: 652
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)