Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt26b08
         (676 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069781-1|AAC26858.1|  338|Drosophila melanogaster Bem46-like p...    74   2e-13
AE014134-529|AAF51169.1|  338|Drosophila melanogaster CG18642-PA...    74   2e-13
AY113416-1|AAM29421.1|  583|Drosophila melanogaster RE16761p pro...    30   2.5  
AE014298-588|AAF45912.2|  583|Drosophila melanogaster CG6414-PA ...    30   2.5  
AY094910-1|AAM11263.1|  420|Drosophila melanogaster RH14937p pro...    30   3.3  
AE014297-4561|AAF57022.2|  420|Drosophila melanogaster CG9743-PA...    30   3.3  
AY369114-1|AAQ73819.1|  382|Drosophila melanogaster bagpipe prot...    29   7.7  
AY369106-1|AAQ73811.1|  382|Drosophila melanogaster bagpipe prot...    29   7.7  
AY369094-1|AAQ73799.1|  382|Drosophila melanogaster bagpipe prot...    29   7.7  

>AF069781-1|AAC26858.1|  338|Drosophila melanogaster Bem46-like
           protein protein.
          Length = 338

 Score = 74.1 bits (174), Expect = 2e-13
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
 Frame = +1

Query: 373 LLFWFHGFLTAFGIFTLGISGILYCAQDLLLYYPNDPPDSRVFVLQPSNYKLPYESIKIN 552
           + ++F+G      +F   I  I Y AQDLLLY+P+ P +SR+++  P+ + LP+ ++ I 
Sbjct: 27  IFYYFYGGYMTLALFAGIILLIFYYAQDLLLYHPDLPANSRIYIPIPTMHNLPHITVSIK 86

Query: 553 NKDGLKIHMFLVKQP-FNSKYIPTMIFFHGKCWKYGAKV 666
             D + +H F V QP   SK  PT+++FHG     G ++
Sbjct: 87  TPDDVTLHAFWVTQPEERSKSSPTLLYFHGNAGNMGHRM 125


>AE014134-529|AAF51169.1|  338|Drosophila melanogaster CG18642-PA
           protein.
          Length = 338

 Score = 74.1 bits (174), Expect = 2e-13
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
 Frame = +1

Query: 373 LLFWFHGFLTAFGIFTLGISGILYCAQDLLLYYPNDPPDSRVFVLQPSNYKLPYESIKIN 552
           + ++F+G      +F   I  I Y AQDLLLY+P+ P +SR+++  P+ + LP+ ++ I 
Sbjct: 27  IFYYFYGGYMTLALFAGIILLIFYYAQDLLLYHPDLPANSRIYIPIPTMHNLPHITVSIK 86

Query: 553 NKDGLKIHMFLVKQP-FNSKYIPTMIFFHGKCWKYGAKV 666
             D + +H F V QP   SK  PT+++FHG     G ++
Sbjct: 87  TPDDVTLHAFWVTQPEERSKSSPTLLYFHGNAGNMGHRM 125


>AY113416-1|AAM29421.1|  583|Drosophila melanogaster RE16761p
           protein.
          Length = 583

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 10/38 (26%), Positives = 25/38 (65%)
 Frame = +1

Query: 553 NKDGLKIHMFLVKQPFNSKYIPTMIFFHGKCWKYGAKV 666
           ++D L ++++  ++P  +  +P M++FHG  W+ G+ +
Sbjct: 108 SEDCLYLNVYTPERPRTNGSLPVMVWFHGGGWQCGSGI 145


>AE014298-588|AAF45912.2|  583|Drosophila melanogaster CG6414-PA
           protein.
          Length = 583

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 10/38 (26%), Positives = 25/38 (65%)
 Frame = +1

Query: 553 NKDGLKIHMFLVKQPFNSKYIPTMIFFHGKCWKYGAKV 666
           ++D L ++++  ++P  +  +P M++FHG  W+ G+ +
Sbjct: 108 SEDCLYLNVYTPERPRTNGSLPVMVWFHGGGWQCGSGI 145


>AY094910-1|AAM11263.1|  420|Drosophila melanogaster RH14937p
           protein.
          Length = 420

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 561 IFIVNFYTFIWQLVITWL 508
           +F  NFYTF+W +V  W+
Sbjct: 123 LFYANFYTFLWVVVTVWV 140


>AE014297-4561|AAF57022.2|  420|Drosophila melanogaster CG9743-PA
           protein.
          Length = 420

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 561 IFIVNFYTFIWQLVITWL 508
           +F  NFYTF+W +V  W+
Sbjct: 123 LFYANFYTFLWVVVTVWV 140


>AY369114-1|AAQ73819.1|  382|Drosophila melanogaster bagpipe
           protein.
          Length = 382

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +1

Query: 445 CAQDLLLYYPNDPPDSRVFVLQPSNYKLPYESIKINN 555
           C +DL LY    P + +    QPSNY   Y +   NN
Sbjct: 69  CCRDLSLYKLTQPKEIQPSARQPSNYLQYYAAAMDNN 105


>AY369106-1|AAQ73811.1|  382|Drosophila melanogaster bagpipe
           protein.
          Length = 382

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +1

Query: 445 CAQDLLLYYPNDPPDSRVFVLQPSNYKLPYESIKINN 555
           C +DL LY    P + +    QPSNY   Y +   NN
Sbjct: 69  CCRDLSLYKLTQPKEIQPSARQPSNYLQYYAAAMDNN 105


>AY369094-1|AAQ73799.1|  382|Drosophila melanogaster bagpipe
           protein.
          Length = 382

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +1

Query: 445 CAQDLLLYYPNDPPDSRVFVLQPSNYKLPYESIKINN 555
           C +DL LY    P + +    QPSNY   Y +   NN
Sbjct: 69  CCRDLSLYKLTQPKEIQPSARQPSNYLQYYAAAMDNN 105


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,476,959
Number of Sequences: 53049
Number of extensions: 565751
Number of successful extensions: 1149
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)