Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26a21
(678 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 186 2e-48
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 161 1e-40
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 148 8e-37
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 140 1e-34
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 123 3e-29
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 107 2e-24
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 91 1e-19
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 66 3e-12
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 52 1e-07
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 26 5.8
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 186 bits (454), Expect = 2e-48
Identities = 90/149 (60%), Positives = 104/149 (69%)
Frame = +3
Query: 231 EKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 410
+ V FD++ GD+ +G + IGLFGKTVPKT ENF LA +G GY+GS FHRVI NFMIQ
Sbjct: 27 DTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQ 86
Query: 411 XXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLD 590
+SIYG RF DENFKL H G LSMANAG D+NGSQFFITTVKTPWLD
Sbjct: 87 GGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLD 146
Query: 591 GRHVVFGKVLEGMDVVQKIEMTVTGANDR 677
G HVVFG+VL G D+V+KI T D+
Sbjct: 147 GHHVVFGEVLSGYDIVKKISKAETDNRDK 175
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 161 bits (390), Expect = 1e-40
Identities = 79/136 (58%), Positives = 90/136 (66%)
Frame = +3
Query: 243 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXX 422
FD+ +G IV LF VPKT NF L +G GY GS FHRVI FM+Q
Sbjct: 6 FDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDF 65
Query: 423 XXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHV 602
+SIYGE+F DENF LKH G LSMANAG +TNGSQFFITTV TPWLDG+HV
Sbjct: 66 TRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHV 125
Query: 603 VFGKVLEGMDVVQKIE 650
VFG+V EGMDVV+K+E
Sbjct: 126 VFGEVTEGMDVVKKVE 141
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 148 bits (358), Expect = 8e-37
Identities = 82/151 (54%), Positives = 95/151 (62%), Gaps = 4/151 (2%)
Frame = +3
Query: 234 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG----YKGSKFHRVIKNF 401
K+S D KI TI LF VPKT +NF L E +G YKGS+FHRVIKNF
Sbjct: 8 KISIDGKIQP----TIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNF 63
Query: 402 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTP 581
M+Q SIYGE+FEDENF+LKH LSMANAG +TNGSQFFITTV TP
Sbjct: 64 MLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTP 123
Query: 582 WLDGRHVVFGKVLEGMDVVQKIEMTVTGAND 674
LDG+HVVFGKV++G V+ IE T +D
Sbjct: 124 HLDGKHVVFGKVIQGKSTVRTIENLETKNDD 154
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 140 bits (340), Expect = 1e-34
Identities = 82/162 (50%), Positives = 98/162 (60%), Gaps = 10/162 (6%)
Frame = +3
Query: 222 IANEKVSF-DMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--------QKPEGEGYKGS 374
++ E V F D+ I +G I I LF VPKT ENF Q QKP G YK S
Sbjct: 1 MSTEPVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIG--YKNS 58
Query: 375 KFHRVIKNFMIQXXXXXXXXXXXXRSIYGER-FEDENFKLKHYGAGWLSMANAGKDTNGS 551
FHR+I+ FMIQ +I+ R F DENF LKH G LSMANAGKD+NG
Sbjct: 59 TFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGC 118
Query: 552 QFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDR 677
QFFITTV +LDG+HVVFG+V+EG D+V++IE T GAN R
Sbjct: 119 QFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANSR 160
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 123 bits (296), Expect = 3e-29
Identities = 65/138 (47%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
Frame = +3
Query: 267 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 446
++G I+I L+ + PKT +NF+ LA+ EG Y G FHRVI +F+IQ
Sbjct: 9 SLGKILIELYTEHAPKTCQNFYTLAK--EGY-YDGVIFHRVIPDFVIQGGDPTGTGRGGT 65
Query: 447 RSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLE 623
SIYG++F+DE + L H GAG LSMANAG +TN SQFFIT TPWLDG+H +FG+V+
Sbjct: 66 -SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVS 124
Query: 624 GMDVVQKIEMTVTGANDR 677
G+ V +++ + T ++DR
Sbjct: 125 GLSVCKRMGLIRTDSSDR 142
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 107 bits (256), Expect = 2e-24
Identities = 62/136 (45%), Positives = 78/136 (57%), Gaps = 1/136 (0%)
Frame = +3
Query: 273 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 452
G I I L+ + PK +NF A E Y + FHR+IKNFMIQ S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTTHA---ENGYYDNTIFHRIIKNFMIQGGDPLGDGTGG-ES 519
Query: 453 IYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 629
I+ + FEDE + LKH +SMAN+G +TNGSQFFITT TPWLDG+H +F + G+
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGL 579
Query: 630 DVVQKIEMTVTGANDR 677
DVV +IE T DR
Sbjct: 580 DVVHRIEQGETDKYDR 595
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 91.1 bits (216), Expect = 1e-19
Identities = 56/137 (40%), Positives = 75/137 (54%), Gaps = 1/137 (0%)
Frame = +3
Query: 267 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 446
N G I I L P NF QLA++ Y+ + FHR I FMIQ
Sbjct: 283 NHGEINIELHTDYAPHAVYNFVQLAKQGY---YRNTIFHRNIARFMIQGGDPSGTGRGG- 338
Query: 447 RSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLE 623
+SI+G+ F+DE LKH G +SMAN GK+TNGSQFFI LD +H +FG+V+
Sbjct: 339 QSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVG 398
Query: 624 GMDVVQKIEMTVTGAND 674
G++V+ +E T +ND
Sbjct: 399 GLNVLDALEKVPTNSND 415
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 66.5 bits (155), Expect = 3e-12
Identities = 46/117 (39%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Frame = +3
Query: 273 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 452
G I I L+ K VPK NF QL EG Y G+ HRV+ F+IQ S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTGTGMGG-ES 77
Query: 453 IYGERFEDENF-KLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVL 620
IYGE F E +L+ G + MA + N SQFFIT TP +G+ +FG+V+
Sbjct: 78 IYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 51.6 bits (118), Expect = 1e-07
Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Frame = +3
Query: 261 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 440
+ +G +VI LF K PKT ENF +L + + Y F+ + N+ Q
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLCKL---KYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 441 XXRSIY-----GERFEDENF--KLKHYGAGWLSMANA---GKDTN----GSQFFIT-TVK 575
R ++ G RF F L H G +SM+ A +D GSQF IT +
Sbjct: 63 GGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDN 122
Query: 576 TPWLDGRHVVFGKVLEGMDVVQKI 647
LD R+ ++G+V EG D + KI
Sbjct: 123 LEGLDERYPIYGQVAEGFDTLLKI 146
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.8 bits (54), Expect = 5.8
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -2
Query: 449 APSSSITLGKITTLDHEIFNYSVELAPFVPLPLRFLS*LKEVLSCLRYSLS 297
+PSS + L K+ LDH + + S P P +++ K+ S L+ + S
Sbjct: 186 SPSSLVPLLKLPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSS 236
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,711,614
Number of Sequences: 5004
Number of extensions: 55017
Number of successful extensions: 155
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 144
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 311890690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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