Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26a12
(226 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z28622-1|CAA82262.1| 1293|Drosophila melanogaster xeroderma pigm... 27 4.7
AY070566-1|AAL48037.1| 1293|Drosophila melanogaster LD47533p pro... 27 4.7
AY060259-1|AAL25298.1| 228|Drosophila melanogaster GH08630p pro... 27 4.7
AF209743-1|AAF24766.1| 1293|Drosophila melanogaster XPC-like pro... 27 4.7
AE014297-2887|AAF55820.1| 228|Drosophila melanogaster CG10830-P... 27 4.7
AE013599-2037|AAF58150.1| 1293|Drosophila melanogaster CG8153-PA... 27 4.7
AE013599-2036|AAM68530.1| 1294|Drosophila melanogaster CG8153-PC... 27 4.7
Y07653-1|CAA68937.1| 1263|Drosophila melanogaster spalt-related ... 26 6.2
BT025221-1|ABF17912.1| 1427|Drosophila melanogaster FI01019p pro... 26 6.2
BT016151-1|AAV37036.1| 1267|Drosophila melanogaster AT17006p pro... 26 6.2
BT016144-1|AAV37029.1| 1267|Drosophila melanogaster AT24316p pro... 26 6.2
AY118404-1|AAM48433.1| 1016|Drosophila melanogaster RE61305p pro... 26 6.2
AE014297-4201|AAF56762.2| 1427|Drosophila melanogaster CG4976-PA... 26 6.2
AE014134-2065|AAN10780.1| 1267|Drosophila melanogaster CG4881-PB... 26 6.2
AE014134-2064|AAF53096.1| 1267|Drosophila melanogaster CG4881-PA... 26 6.2
>Z28622-1|CAA82262.1| 1293|Drosophila melanogaster xeroderma
pigmentosum group Ccomplementing factor protein.
Length = 1293
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 113 FLSPAKNAAISPSTLVNLKPWPLRPVTS 30
F++ A+ + +VNL+P PLRP S
Sbjct: 486 FIALARGMGMHCRLIVNLQPMPLRPAAS 513
>AY070566-1|AAL48037.1| 1293|Drosophila melanogaster LD47533p
protein.
Length = 1293
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 113 FLSPAKNAAISPSTLVNLKPWPLRPVTS 30
F++ A+ + +VNL+P PLRP S
Sbjct: 486 FIALARGMGMHCRLIVNLQPMPLRPAAS 513
>AY060259-1|AAL25298.1| 228|Drosophila melanogaster GH08630p
protein.
Length = 228
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 43 LSGHGFKFTSVLGEIAAFFAGDKKPGFDIRPFALNRFNH 159
L HG++ G A A + KPG D NR+NH
Sbjct: 184 LHDHGYRMAGSCGSGTAGSAAEPKPGVDTEE---NRWNH 219
>AF209743-1|AAF24766.1| 1293|Drosophila melanogaster XPC-like
protein isoform a protein.
Length = 1293
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 113 FLSPAKNAAISPSTLVNLKPWPLRPVTS 30
F++ A+ + +VNL+P PLRP S
Sbjct: 486 FIALARGMGMHCRLIVNLQPMPLRPAAS 513
>AE014297-2887|AAF55820.1| 228|Drosophila melanogaster CG10830-PA
protein.
Length = 228
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 43 LSGHGFKFTSVLGEIAAFFAGDKKPGFDIRPFALNRFNH 159
L HG++ G A A + KPG D NR+NH
Sbjct: 184 LHDHGYRMAGSCGSGTAGSAAEPKPGVDTEE---NRWNH 219
>AE013599-2037|AAF58150.1| 1293|Drosophila melanogaster CG8153-PA,
isoform A protein.
Length = 1293
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 113 FLSPAKNAAISPSTLVNLKPWPLRPVTS 30
F++ A+ + +VNL+P PLRP S
Sbjct: 486 FIALARGMGMHCRLIVNLQPMPLRPAAS 513
>AE013599-2036|AAM68530.1| 1294|Drosophila melanogaster CG8153-PC,
isoform C protein.
Length = 1294
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 113 FLSPAKNAAISPSTLVNLKPWPLRPVTS 30
F++ A+ + +VNL+P PLRP S
Sbjct: 487 FIALARGMGMHCRLIVNLQPMPLRPAAS 514
>Y07653-1|CAA68937.1| 1263|Drosophila melanogaster spalt-related
protein.
Length = 1263
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 137 NGLISKPGFLSPAKNAAISPSTLVNLKPWPLRP 39
NGL KPG LSP I P N +P P
Sbjct: 1141 NGLPPKPGELSPGAFPNIPPPPFANGGKYPYPP 1173
>BT025221-1|ABF17912.1| 1427|Drosophila melanogaster FI01019p protein.
Length = 1427
Score = 26.2 bits (55), Expect = 6.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 165 NFVWRGLMNDNNKITFCQKK 224
N++W LMN++ K FC K
Sbjct: 1349 NYLWDDLMNNSKKACFCGAK 1368
>BT016151-1|AAV37036.1| 1267|Drosophila melanogaster AT17006p protein.
Length = 1267
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 137 NGLISKPGFLSPAKNAAISPSTLVNLKPWPLRP 39
NGL KPG LSP I P N +P P
Sbjct: 1145 NGLPPKPGELSPGAFPNIPPPPFANGGKYPYPP 1177
>BT016144-1|AAV37029.1| 1267|Drosophila melanogaster AT24316p protein.
Length = 1267
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 137 NGLISKPGFLSPAKNAAISPSTLVNLKPWPLRP 39
NGL KPG LSP I P N +P P
Sbjct: 1145 NGLPPKPGELSPGAFPNIPPPPFANGGKYPYPP 1177
>AY118404-1|AAM48433.1| 1016|Drosophila melanogaster RE61305p
protein.
Length = 1016
Score = 26.2 bits (55), Expect = 6.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 165 NFVWRGLMNDNNKITFCQKK 224
N++W LMN++ K FC K
Sbjct: 938 NYLWDDLMNNSKKACFCGAK 957
>AE014297-4201|AAF56762.2| 1427|Drosophila melanogaster CG4976-PA
protein.
Length = 1427
Score = 26.2 bits (55), Expect = 6.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 165 NFVWRGLMNDNNKITFCQKK 224
N++W LMN++ K FC K
Sbjct: 1349 NYLWDDLMNNSKKACFCGAK 1368
>AE014134-2065|AAN10780.1| 1267|Drosophila melanogaster CG4881-PB,
isoform B protein.
Length = 1267
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 137 NGLISKPGFLSPAKNAAISPSTLVNLKPWPLRP 39
NGL KPG LSP I P N +P P
Sbjct: 1145 NGLPPKPGELSPGAFPNIPPPPFANGGKYPYPP 1177
>AE014134-2064|AAF53096.1| 1267|Drosophila melanogaster CG4881-PA,
isoform A protein.
Length = 1267
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 137 NGLISKPGFLSPAKNAAISPSTLVNLKPWPLRP 39
NGL KPG LSP I P N +P P
Sbjct: 1145 NGLPPKPGELSPGAFPNIPPPPFANGGKYPYPP 1177
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,811,674
Number of Sequences: 53049
Number of extensions: 171104
Number of successful extensions: 585
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 24,988,368
effective HSP length: 54
effective length of database: 22,123,722
effective search space used: 442474440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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