Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt26a12
(226 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23529-6|AAL32208.1| 384|Caenorhabditis elegans Hypothetical pr... 33 0.021
AF016657-15|AAB93658.1| 257|Caenorhabditis elegans Hypothetical... 27 1.4
Z68341-2|CAA92765.2| 649|Caenorhabditis elegans Hypothetical pr... 26 3.1
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr... 26 3.1
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr... 26 3.1
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z81549-2|CAB04473.1| 167|Caenorhabditis elegans Hypothetical pr... 26 4.1
U23529-5|AAL32212.2| 385|Caenorhabditis elegans Hypothetical pr... 26 4.1
AF043698-4|AAB97560.1| 275|Caenorhabditis elegans Hypothetical ... 26 4.1
AF043698-3|AAK68268.1| 268|Caenorhabditis elegans Hypothetical ... 26 4.1
U41007-21|AAK84502.1| 465|Caenorhabditis elegans Hypothetical p... 25 5.5
U41007-20|AAA82275.1| 455|Caenorhabditis elegans Hypothetical p... 25 5.5
U39740-3|AAA80426.2| 542|Caenorhabditis elegans C.elegans homeo... 25 5.5
U39740-2|AAM69077.1| 540|Caenorhabditis elegans C.elegans homeo... 25 5.5
U16367-1|AAA52203.1| 542|Caenorhabditis elegans CEH-18 protein. 25 5.5
AC006673-1|AAF39927.1| 272|Caenorhabditis elegans Hypothetical ... 25 5.5
Z93385-10|CAB07643.1| 702|Caenorhabditis elegans Hypothetical p... 25 7.2
Z81114-7|CAB03290.1| 702|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z81067-5|CAD92378.1| 965|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical pr... 25 7.2
U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta p... 25 7.2
AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical... 25 7.2
AF025456-2|AAB70958.1| 441|Caenorhabditis elegans Hypothetical ... 25 7.2
Z73977-1|CAA98290.1| 573|Caenorhabditis elegans Hypothetical pr... 25 9.6
Z50795-4|CAA90666.1| 529|Caenorhabditis elegans Hypothetical pr... 25 9.6
DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-t... 25 9.6
AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-t... 25 9.6
AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel... 25 9.6
AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel... 25 9.6
AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel... 25 9.6
AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel... 25 9.6
AC024791-20|AAO12400.1| 574|Caenorhabditis elegans Hypothetical... 25 9.6
AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical... 25 9.6
>U23529-6|AAL32208.1| 384|Caenorhabditis elegans Hypothetical
protein C15B12.1 protein.
Length = 384
Score = 33.5 bits (73), Expect = 0.021
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 4 TLPGSENVMLVTGL-SGHGFKFTSVLGEIAAFFAGDKKPGFDIRPFALNRF 153
T+P +LV G SG GFK +G+ A A KK D+ F+ NRF
Sbjct: 329 TIPTKNPNILVGGCGSGSGFKVAPGIGKALAEMAAGKKTTVDVSFFSANRF 379
>AF016657-15|AAB93658.1| 257|Caenorhabditis elegans Hypothetical
protein C16C4.14 protein.
Length = 257
Score = 27.5 bits (58), Expect = 1.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 186 LNHAKQNLHMIKSIQRKRSDIKTRFFVP 103
L+H +N+ IK + SDI+TRF +P
Sbjct: 104 LSHTVKNMSSIKEGEEYFSDIQTRFNIP 131
>Z68341-2|CAA92765.2| 649|Caenorhabditis elegans Hypothetical
protein F01G4.4 protein.
Length = 649
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 146 FNANGLISKPGFLSPAKNAAISPSTLVNLKPWPLRP 39
+N NG +S GF+ + VN+ P LRP
Sbjct: 179 YNINGYLSINGFVLRGPGGVVRNKNQVNIPPDALRP 214
>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical
protein F13B9.1c protein.
Length = 1609
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/40 (22%), Positives = 19/40 (47%)
Frame = -2
Query: 201 YYYHSLNHAKQNLHMIKSIQRKRSDIKTRFFVPSKERSDF 82
YYY H +QN++ + + + + + P+ E + F
Sbjct: 166 YYYSQQQHTQQNVYQTNHVHPEETQVVAQALQPTAESTYF 205
>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical
protein F13B9.1b protein.
Length = 1614
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/40 (22%), Positives = 19/40 (47%)
Frame = -2
Query: 201 YYYHSLNHAKQNLHMIKSIQRKRSDIKTRFFVPSKERSDF 82
YYY H +QN++ + + + + + P+ E + F
Sbjct: 166 YYYSQQQHTQQNVYQTNHVHPEETQVVAQALQPTAESTYF 205
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical
protein F13B9.1a protein.
Length = 1632
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/40 (22%), Positives = 19/40 (47%)
Frame = -2
Query: 201 YYYHSLNHAKQNLHMIKSIQRKRSDIKTRFFVPSKERSDF 82
YYY H +QN++ + + + + + P+ E + F
Sbjct: 166 YYYSQQQHTQQNVYQTNHVHPEETQVVAQALQPTAESTYF 205
>Z81549-2|CAB04473.1| 167|Caenorhabditis elegans Hypothetical
protein F55C9.3 protein.
Length = 167
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 198 YYHSLNHAKQNLHMIKSIQRKRSDIKTRFFVPSKERSDFAEHTCKFKT 55
Y L H K L + + +S ++T FF+ K+ S C F T
Sbjct: 97 YNVELRHPKLRLFHFTNETQAKSPVETPFFLNHKKSSFLTFFNCFFNT 144
>U23529-5|AAL32212.2| 385|Caenorhabditis elegans Hypothetical
protein C15B12.8 protein.
Length = 385
Score = 25.8 bits (54), Expect = 4.1
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 16 SENVMLVTGL--SGHGFKFTSVLGEIAAFFAGDKKPGFDIRPFALNRF 153
SEN ++ G SG GFK +G A A K D+ F+ +RF
Sbjct: 334 SENSKILVGGCGSGSGFKTAPGIGRSLAEMAAGKSTTVDVTFFSPSRF 381
>AF043698-4|AAB97560.1| 275|Caenorhabditis elegans Hypothetical
protein C54G6.1a protein.
Length = 275
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -2
Query: 177 AKQNLHMIKSIQRKRSDIKTRFFVPSKERSDFAEHTCKFKTV 52
A Q++HM+K + RK+ D+ ++ S ++ E K V
Sbjct: 144 AIQHVHMLKQLYRKKRDLYNVQYLRSGREFEYCEKLSFLKDV 185
>AF043698-3|AAK68268.1| 268|Caenorhabditis elegans Hypothetical
protein C54G6.1b protein.
Length = 268
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -2
Query: 177 AKQNLHMIKSIQRKRSDIKTRFFVPSKERSDFAEHTCKFKTV 52
A Q++HM+K + RK+ D+ ++ S ++ E K V
Sbjct: 137 AIQHVHMLKQLYRKKRDLYNVQYLRSGREFEYCEKLSFLKDV 178
>U41007-21|AAK84502.1| 465|Caenorhabditis elegans Hypothetical
protein C33H5.18b protein.
Length = 465
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 64 FTSVLGEIAAFFAGDKKPGFDIRPF 138
F S+LG FFA K F I+ F
Sbjct: 372 FASILGPFGGFFASGFKRAFKIKDF 396
>U41007-20|AAA82275.1| 455|Caenorhabditis elegans Hypothetical
protein C33H5.18a protein.
Length = 455
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 64 FTSVLGEIAAFFAGDKKPGFDIRPF 138
F S+LG FFA K F I+ F
Sbjct: 362 FASILGPFGGFFASGFKRAFKIKDF 386
>U39740-3|AAA80426.2| 542|Caenorhabditis elegans C.elegans homeobox
protein 18,isoform a protein.
Length = 542
Score = 25.4 bits (53), Expect = 5.5
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 155 LNLFNANGL-ISKPGFLSPAKNAAISPSTLVNLKPWPLRPVTSIT 24
L ANGL S G LS + A SP+ L +L P +P S+T
Sbjct: 210 LGFLGANGLGASNSGLLS-SPLIAPSPTLLQSLMNTPTQPTASLT 253
>U39740-2|AAM69077.1| 540|Caenorhabditis elegans C.elegans homeobox
protein 18,isoform b protein.
Length = 540
Score = 25.4 bits (53), Expect = 5.5
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 155 LNLFNANGL-ISKPGFLSPAKNAAISPSTLVNLKPWPLRPVTSIT 24
L ANGL S G LS + A SP+ L +L P +P S+T
Sbjct: 208 LGFLGANGLGASNSGLLS-SPLIAPSPTLLQSLMNTPTQPTASLT 251
>U16367-1|AAA52203.1| 542|Caenorhabditis elegans CEH-18 protein.
Length = 542
Score = 25.4 bits (53), Expect = 5.5
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 155 LNLFNANGL-ISKPGFLSPAKNAAISPSTLVNLKPWPLRPVTSIT 24
L ANGL S G LS + A SP+ L +L P +P S+T
Sbjct: 210 LGFLGANGLGASNSGLLS-SPLIAPSPTLLQSLMNTPTQPTASLT 253
>AC006673-1|AAF39927.1| 272|Caenorhabditis elegans Hypothetical
protein K09D9.9 protein.
Length = 272
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -2
Query: 198 YYHSLNHAKQNLHMIKSIQRKRSDIKTRFFVPSKERSD 85
+ H+L +++ ++S+QR R + K SK+R+D
Sbjct: 209 FAHTLPRSREENGFVESMQRLRMEKKFMLMGASKDRTD 246
>Z93385-10|CAB07643.1| 702|Caenorhabditis elegans Hypothetical
protein M01E5.6 protein.
Length = 702
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 15 FGERYASDRSERPRF*IYKCARRNRCVLCWGQKT 116
F YA + PRF + +C N+ LC KT
Sbjct: 198 FDRLYAEYQKNLPRFQVRQCLHLNKEFLCVYSKT 231
>Z81114-7|CAB03290.1| 702|Caenorhabditis elegans Hypothetical
protein M01E5.6 protein.
Length = 702
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 15 FGERYASDRSERPRF*IYKCARRNRCVLCWGQKT 116
F YA + PRF + +C N+ LC KT
Sbjct: 198 FDRLYAEYQKNLPRFQVRQCLHLNKEFLCVYSKT 231
>Z81067-5|CAD92378.1| 965|Caenorhabditis elegans Hypothetical
protein F23A7.7 protein.
Length = 965
Score = 25.0 bits (52), Expect = 7.2
Identities = 8/43 (18%), Positives = 22/43 (51%)
Frame = -2
Query: 162 HMIKSIQRKRSDIKTRFFVPSKERSDFAEHTCKFKTVAAQTGH 34
+++ + R+ +++ ++ +E SDF + F+ + GH
Sbjct: 53 NLVPEVVREGEEVEVNSYLDDEETSDFIDENGDFRYPVDELGH 95
>Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical
protein ZK1058.2 protein.
Length = 809
Score = 25.0 bits (52), Expect = 7.2
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +3
Query: 18 GERYASDRSERPRF*IYKCARRNRCVLCWGQKTGF*YQTVC 140
G RY+ + E KC CV+C +TG +T C
Sbjct: 636 GNRYSGAKCEICPTCPTKCVEYKNCVMCQQWQTGPLNETAC 676
>U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta
pat-3 protein.
Length = 809
Score = 25.0 bits (52), Expect = 7.2
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +3
Query: 18 GERYASDRSERPRF*IYKCARRNRCVLCWGQKTGF*YQTVC 140
G RY+ + E KC CV+C +TG +T C
Sbjct: 636 GNRYSGAKCEICPTCPTKCVEYKNCVMCQQWQTGPLNETAC 676
>AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical
protein F57B10.1 protein.
Length = 690
Score = 25.0 bits (52), Expect = 7.2
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = -3
Query: 143 NANGLI----SKPGFLSPAKNAAISPSTLVNLKPWPLRPVTSITFS 18
N+NGL+ S+P L+PA + +PS+ N + P TS + S
Sbjct: 188 NSNGLVRFKSSQPRVLNPASISLNAPSSSFNPQSTSSTPATSSSSS 233
>AF025456-2|AAB70958.1| 441|Caenorhabditis elegans Hypothetical
protein C46F9.3 protein.
Length = 441
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 186 LNHAKQNLHMIKSIQRKRSDIKTRFFVPSK 97
L+H +N+ IK +DI+TRF +P K
Sbjct: 285 LSHTVRNMSSIKEGGDYLTDIQTRFNIPWK 314
>Z73977-1|CAA98290.1| 573|Caenorhabditis elegans Hypothetical
protein T28B11.1 protein.
Length = 573
Score = 24.6 bits (51), Expect = 9.6
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -2
Query: 204 SYYYHSLNHAKQNLHMIKSIQRKRSDIKTRFFVPSKERSDFAEHTCK 64
SY Y+ + ++LH I + RS + F E S E TC+
Sbjct: 411 SYKYNEFMNIIEHLHDIIEKRPPRSPMNRSFGNEQNEHSIVLERTCR 457
>Z50795-4|CAA90666.1| 529|Caenorhabditis elegans Hypothetical
protein R166.4 protein.
Length = 529
Score = 24.6 bits (51), Expect = 9.6
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -2
Query: 162 HMIKSIQRKRSDIKTRFFVPSKERSDFAEHTCKFKTV 52
H + RS I T F+P + EH KF+ V
Sbjct: 321 HQCLKVSTMRSVINTLRFIPFWKTISGGEHVAKFRPV 357
>DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1797
Score = 24.6 bits (51), Expect = 9.6
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 152 NLFNANGLISKPGFLSPAKNA 90
N+++ NG +S+P +P KNA
Sbjct: 758 NMYSENGDLSRPSDSAPKKNA 778
>AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1831
Score = 24.6 bits (51), Expect = 9.6
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 152 NLFNANGLISKPGFLSPAKNA 90
N+++ NG +S+P +P KNA
Sbjct: 792 NMYSENGDLSRPSDSAPKKNA 812
>AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
b protein.
Length = 978
Score = 24.6 bits (51), Expect = 9.6
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 152 NLFNANGLISKPGFLSPAKNA 90
N+++ NG +S+P +P KNA
Sbjct: 816 NMYSENGDLSRPSDSAPKKNA 836
>AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
a protein.
Length = 1562
Score = 24.6 bits (51), Expect = 9.6
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 152 NLFNANGLISKPGFLSPAKNA 90
N+++ NG +S+P +P KNA
Sbjct: 850 NMYSENGDLSRPSDSAPKKNA 870
>AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
c protein.
Length = 1913
Score = 24.6 bits (51), Expect = 9.6
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 152 NLFNANGLISKPGFLSPAKNA 90
N+++ NG +S+P +P KNA
Sbjct: 903 NMYSENGDLSRPSDSAPKKNA 923
>AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
d protein.
Length = 1861
Score = 24.6 bits (51), Expect = 9.6
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 152 NLFNANGLISKPGFLSPAKNA 90
N+++ NG +S+P +P KNA
Sbjct: 822 NMYSENGDLSRPSDSAPKKNA 842
>AC024791-20|AAO12400.1| 574|Caenorhabditis elegans Hypothetical
protein Y47G6A.5b protein.
Length = 574
Score = 24.6 bits (51), Expect = 9.6
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -3
Query: 83 SPSTLVNLKPWPLRPVT-SITFSEP 12
+PS V KP PLRP T S++ ++P
Sbjct: 5 TPSVAVPAKPPPLRPSTQSVSSTDP 29
>AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical
protein Y47G6A.5a protein.
Length = 618
Score = 24.6 bits (51), Expect = 9.6
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -3
Query: 83 SPSTLVNLKPWPLRPVT-SITFSEP 12
+PS V KP PLRP T S++ ++P
Sbjct: 49 TPSVAVPAKPPPLRPSTQSVSSTDP 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,139,807
Number of Sequences: 27780
Number of extensions: 91549
Number of successful extensions: 240
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 12,740,198
effective HSP length: 54
effective length of database: 11,240,078
effective search space used: 224801560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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