Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25p11
         (454 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC065034-1|AAH65034.1|  443|Homo sapiens FLJ25778 protein protein.     30   3.2  
AK125956-1|BAC86361.1| 1264|Homo sapiens protein ( Homo sapiens ...    30   3.2  
AB107352-1|BAC67657.1| 1023|Homo sapiens KIAA2030 protein protein.     30   3.2  

>BC065034-1|AAH65034.1|  443|Homo sapiens FLJ25778 protein protein.
          Length = 443

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +3

Query: 204 LWESSENPLAPLXSDQREAILDLESLIXXVNDEGGENGPIEKETVDRKSIPSVDTT 371
           L++ +EN L  L     + +LD  S    +++ GGENG   + T   + +P V  T
Sbjct: 160 LFQEAENALEMLDDFDFDRLLDAASDGSPLSESGGENGTTTQPTYTSQVMPKVVPT 215


>AK125956-1|BAC86361.1| 1264|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43968 fis, clone TESTI4017543, weakly  similar
           to Homo sapiens ubinuclein 1 (UBN1). ).
          Length = 1264

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +3

Query: 204 LWESSENPLAPLXSDQREAILDLESLIXXVNDEGGENGPIEKETVDRKSIPSVDTT 371
           L++ +EN L  L     + +LD  S    +++ GGENG   + T   + +P V  T
Sbjct: 309 LFQEAENALEMLDDFDFDRLLDAASDGSPLSESGGENGTTTQPTYTSQVMPKVVPT 364


>AB107352-1|BAC67657.1| 1023|Homo sapiens KIAA2030 protein protein.
          Length = 1023

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +3

Query: 204 LWESSENPLAPLXSDQREAILDLESLIXXVNDEGGENGPIEKETVDRKSIPSVDTT 371
           L++ +EN L  L     + +LD  S    +++ GGENG   + T   + +P V  T
Sbjct: 68  LFQEAENALEMLDDFDFDRLLDAASDGSPLSESGGENGTTTQPTYTSQVMPKVVPT 123


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,968,662
Number of Sequences: 237096
Number of extensions: 878967
Number of successful extensions: 1913
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1913
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)