Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25p08
         (690 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX640896-1|CAE45944.1| 1359|Homo sapiens hypothetical protein pr...    32   2.2  
BX537759-1|CAD97828.1| 1763|Homo sapiens hypothetical protein pr...    32   2.2  
BX537421-1|CAD97663.1| 1204|Homo sapiens hypothetical protein pr...    32   2.2  
BC146782-1|AAI46783.1| 1814|Homo sapiens CDK5 regulatory subunit...    32   2.2  
AL590642-1|CAH70769.1| 1893|Homo sapiens CDK5 regulatory subunit...    32   2.2  
AL391870-3|CAI40927.1| 1287|Homo sapiens CDK5 regulatory subunit...    32   2.2  
AL391870-1|CAI40925.1| 1893|Homo sapiens CDK5 regulatory subunit...    32   2.2  
AL353736-3|CAI40655.1| 1287|Homo sapiens CDK5 regulatory subunit...    32   2.2  
AL353736-1|CAI40653.1| 1893|Homo sapiens CDK5 regulatory subunit...    32   2.2  
AL138836-1|CAI16963.1| 1893|Homo sapiens CDK5 regulatory subunit...    32   2.2  
AL133161-1|CAB61487.1| 1287|Homo sapiens hypothetical protein pr...    32   2.2  
AF448860-1|AAP41926.1| 1893|Homo sapiens hypothetical protein pr...    32   2.2  
AB046853-1|BAB13459.2| 1852|Homo sapiens KIAA1633 protein protein.     32   2.2  

>BX640896-1|CAE45944.1| 1359|Homo sapiens hypothetical protein
           protein.
          Length = 1359

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +1

Query: 373 KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 549
           + T K+  EL+ F  + +   PH ++   C A++ +  E  +  +K       AT + DL
Sbjct: 593 EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 651

Query: 550 LNTKTK-TREQWEEKLNKTNLS 612
           L  K + TRE WEEK   T LS
Sbjct: 652 LRFKHEATREAWEEKPINTALS 673


>BX537759-1|CAD97828.1| 1763|Homo sapiens hypothetical protein
            protein.
          Length = 1763

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +1

Query: 373  KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 549
            + T K+  EL+ F  + +   PH ++   C A++ +  E  +  +K       AT + DL
Sbjct: 824  EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 882

Query: 550  LNTKTK-TREQWEEKLNKTNLS 612
            L  K + TRE WEEK   T LS
Sbjct: 883  LRFKHEATREAWEEKPINTALS 904


>BX537421-1|CAD97663.1| 1204|Homo sapiens hypothetical protein
            protein.
          Length = 1204

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +1

Query: 373  KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 549
            + T K+  EL+ F  + +   PH ++   C A++ +  E  +  +K       AT + DL
Sbjct: 824  EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 882

Query: 550  LNTKTK-TREQWEEKLNKTNLS 612
            L  K + TRE WEEK   T LS
Sbjct: 883  LRFKHEATREAWEEKPINTALS 904


>BC146782-1|AAI46783.1| 1814|Homo sapiens CDK5 regulatory subunit
            associated protein 2 protein.
          Length = 1814

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +1

Query: 373  KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 549
            + T K+  EL+ F  + +   PH ++   C A++ +  E  +  +K       AT + DL
Sbjct: 824  EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 882

Query: 550  LNTKTK-TREQWEEKLNKTNLS 612
            L  K + TRE WEEK   T LS
Sbjct: 883  LRFKHEATREAWEEKPINTALS 904


>AL590642-1|CAH70769.1| 1893|Homo sapiens CDK5 regulatory subunit
            associated protein 2 protein.
          Length = 1893

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +1

Query: 373  KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 549
            + T K+  EL+ F  + +   PH ++   C A++ +  E  +  +K       AT + DL
Sbjct: 824  EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 882

Query: 550  LNTKTK-TREQWEEKLNKTNLS 612
            L  K + TRE WEEK   T LS
Sbjct: 883  LRFKHEATREAWEEKPINTALS 904


>AL391870-3|CAI40927.1| 1287|Homo sapiens CDK5 regulatory subunit
           associated protein 2 protein.
          Length = 1287

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +1

Query: 373 KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 549
           + T K+  EL+ F  + +   PH ++   C A++ +  E  +  +K       AT + DL
Sbjct: 218 EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 276

Query: 550 LNTKTK-TREQWEEKLNKTNLS 612
           L  K + TRE WEEK   T LS
Sbjct: 277 LRFKHEATREAWEEKPINTALS 298


>AL391870-1|CAI40925.1| 1893|Homo sapiens CDK5 regulatory subunit
            associated protein 2 protein.
          Length = 1893

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +1

Query: 373  KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 549
            + T K+  EL+ F  + +   PH ++   C A++ +  E  +  +K       AT + DL
Sbjct: 824  EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 882

Query: 550  LNTKTK-TREQWEEKLNKTNLS 612
            L  K + TRE WEEK   T LS
Sbjct: 883  LRFKHEATREAWEEKPINTALS 904


>AL353736-3|CAI40655.1| 1287|Homo sapiens CDK5 regulatory subunit
           associated protein 2 protein.
          Length = 1287

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +1

Query: 373 KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 549
           + T K+  EL+ F  + +   PH ++   C A++ +  E  +  +K       AT + DL
Sbjct: 218 EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 276

Query: 550 LNTKTK-TREQWEEKLNKTNLS 612
           L  K + TRE WEEK   T LS
Sbjct: 277 LRFKHEATREAWEEKPINTALS 298


>AL353736-1|CAI40653.1| 1893|Homo sapiens CDK5 regulatory subunit
            associated protein 2 protein.
          Length = 1893

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +1

Query: 373  KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 549
            + T K+  EL+ F  + +   PH ++   C A++ +  E  +  +K       AT + DL
Sbjct: 824  EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 882

Query: 550  LNTKTK-TREQWEEKLNKTNLS 612
            L  K + TRE WEEK   T LS
Sbjct: 883  LRFKHEATREAWEEKPINTALS 904


>AL138836-1|CAI16963.1| 1893|Homo sapiens CDK5 regulatory subunit
            associated protein 2 protein.
          Length = 1893

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +1

Query: 373  KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 549
            + T K+  EL+ F  + +   PH ++   C A++ +  E  +  +K       AT + DL
Sbjct: 824  EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 882

Query: 550  LNTKTK-TREQWEEKLNKTNLS 612
            L  K + TRE WEEK   T LS
Sbjct: 883  LRFKHEATREAWEEKPINTALS 904


>AL133161-1|CAB61487.1| 1287|Homo sapiens hypothetical protein
           protein.
          Length = 1287

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +1

Query: 373 KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 549
           + T K+  EL+ F  + +   PH ++   C A++ +  E  +  +K       AT + DL
Sbjct: 218 EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 276

Query: 550 LNTKTK-TREQWEEKLNKTNLS 612
           L  K + TRE WEEK   T LS
Sbjct: 277 LRFKHEATREAWEEKPINTALS 298


>AF448860-1|AAP41926.1| 1893|Homo sapiens hypothetical protein
            protein.
          Length = 1893

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +1

Query: 373  KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 549
            + T K+  EL+ F  + +   PH ++   C A++ +  E  +  +K       AT + DL
Sbjct: 824  EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 882

Query: 550  LNTKTK-TREQWEEKLNKTNLS 612
            L  K + TRE WEEK   T LS
Sbjct: 883  LRFKHEATREAWEEKPINTALS 904


>AB046853-1|BAB13459.2| 1852|Homo sapiens KIAA1633 protein protein.
          Length = 1852

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +1

Query: 373  KSTAKKIDELMPFGISENDELPH-KICFRCSAKVEELHEFVQKCVKTQENLLAATGKKDL 549
            + T K+  EL+ F  + +   PH ++   C A++ +  E  +  +K       AT + DL
Sbjct: 862  EKTPKQKGELVHFVQTNSFSKPHDELKLSCEAQLVKAGEVPKVGLKDASVQTVAT-EGDL 920

Query: 550  LNTKTK-TREQWEEKLNKTNLS 612
            L  K + TRE WEEK   T LS
Sbjct: 921  LRFKHEATREAWEEKPINTALS 942


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,941,966
Number of Sequences: 237096
Number of extensions: 1501953
Number of successful extensions: 3388
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3383
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)