Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25o06
(761 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X89602-1|CAA61761.1| 416|Homo sapiens rTSbeta protein. 288 2e-77
X67098-2|CAA47472.1| 361|Homo sapiens protein ( H.sapiens rTS a... 288 2e-77
BC001285-1|AAH01285.2| 443|Homo sapiens enolase superfamily mem... 288 2e-77
AF305057-2|AAG29536.1| 361|Homo sapiens RTS alpha protein. 288 2e-77
AF305057-1|AAG29537.1| 416|Homo sapiens RTS beta protein. 288 2e-77
AK127818-1|BAC87148.1| 474|Homo sapiens protein ( Homo sapiens ... 252 8e-67
BC047602-1|AAH47602.1| 1884|Homo sapiens RTTN protein protein. 30 7.8
AY598745-1|AAT47519.1| 1068|Homo sapiens AF10 protein. 30 7.8
AL359697-2|CAH73411.1| 1068|Homo sapiens myeloid/lymphoid or mix... 30 7.8
AL358780-4|CAI13980.1| 1068|Homo sapiens myeloid/lymphoid or mix... 30 7.8
AL357372-2|CAI41349.1| 1068|Homo sapiens myeloid/lymphoid or mix... 30 7.8
AL161799-2|CAI39664.1| 1068|Homo sapiens myeloid/lymphoid or mix... 30 7.8
AK128137-1|BAC87292.1| 635|Homo sapiens protein ( Homo sapiens ... 30 7.8
>X89602-1|CAA61761.1| 416|Homo sapiens rTSbeta protein.
Length = 416
Score = 288 bits (706), Expect = 2e-77
Identities = 123/211 (58%), Positives = 162/211 (76%)
Frame = +1
Query: 4 EDDYRRCSAVRRYIGDENVLMVDANQAWSVGQAIEWMKKLAPLKPMWIEEPTSPDDVLGH 183
+DD RRC +R IG E LM+DANQ W V +A+EWM KLA KP+WIEEPTSPDD+LGH
Sbjct: 201 QDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTSPDDILGH 260
Query: 184 ATISEALKPYGIGVATGEMCANRVLFKQFLQSGGMQYCQIDAARIGGVNEILAVYLMAEK 363
ATIS+AL P GIG+ATGE C NRV+FKQ LQ+ +Q+ QID+ R+G VNE L+V LMA+K
Sbjct: 261 ATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKK 320
Query: 364 LRVKVCPHAGGVGLCEMVQHLQFWDYASVSCTMEDRLIEYIDQQHEHFIDPCVVENAKYL 543
+ VCPHAGGVGLCE+VQHL +DY SVS ++E+R+ EY+D HEHF P +++ A Y+
Sbjct: 321 FEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVMIQRASYM 380
Query: 544 APQLPGYSTQFLQETLEKYTYPRGTEWEKMI 636
P+ PGYST+ +E+++K+ YP G W+K++
Sbjct: 381 PPKDPGYSTEMKEESVKKHQYPDGEVWKKLL 411
>X67098-2|CAA47472.1| 361|Homo sapiens protein ( H.sapiens rTS
alpha mRNA containing four open reading frames. ).
Length = 361
Score = 288 bits (706), Expect = 2e-77
Identities = 123/211 (58%), Positives = 162/211 (76%)
Frame = +1
Query: 4 EDDYRRCSAVRRYIGDENVLMVDANQAWSVGQAIEWMKKLAPLKPMWIEEPTSPDDVLGH 183
+DD RRC +R IG E LM+DANQ W V +A+EWM KLA KP+WIEEPTSPDD+LGH
Sbjct: 146 QDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTSPDDILGH 205
Query: 184 ATISEALKPYGIGVATGEMCANRVLFKQFLQSGGMQYCQIDAARIGGVNEILAVYLMAEK 363
ATIS+AL P GIG+ATGE C NRV+FKQ LQ+ +Q+ QID+ R+G VNE L+V LMA+K
Sbjct: 206 ATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKK 265
Query: 364 LRVKVCPHAGGVGLCEMVQHLQFWDYASVSCTMEDRLIEYIDQQHEHFIDPCVVENAKYL 543
+ VCPHAGGVGLCE+VQHL +DY SVS ++E+R+ EY+D HEHF P +++ A Y+
Sbjct: 266 FEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVMIQRASYM 325
Query: 544 APQLPGYSTQFLQETLEKYTYPRGTEWEKMI 636
P+ PGYST+ +E+++K+ YP G W+K++
Sbjct: 326 PPKDPGYSTEMKEESVKKHQYPDGEVWKKLL 356
>BC001285-1|AAH01285.2| 443|Homo sapiens enolase superfamily member
1 protein.
Length = 443
Score = 288 bits (706), Expect = 2e-77
Identities = 123/211 (58%), Positives = 162/211 (76%)
Frame = +1
Query: 4 EDDYRRCSAVRRYIGDENVLMVDANQAWSVGQAIEWMKKLAPLKPMWIEEPTSPDDVLGH 183
+DD RRC +R IG E LM+DANQ W V +A+EWM KLA KP+WIEEPTSPDD+LGH
Sbjct: 228 QDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTSPDDILGH 287
Query: 184 ATISEALKPYGIGVATGEMCANRVLFKQFLQSGGMQYCQIDAARIGGVNEILAVYLMAEK 363
ATIS+AL P GIG+ATGE C NRV+FKQ LQ+ +Q+ QID+ R+G VNE L+V LMA+K
Sbjct: 288 ATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKK 347
Query: 364 LRVKVCPHAGGVGLCEMVQHLQFWDYASVSCTMEDRLIEYIDQQHEHFIDPCVVENAKYL 543
+ VCPHAGGVGLCE+VQHL +DY SVS ++E+R+ EY+D HEHF P +++ A Y+
Sbjct: 348 FEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVMIQRASYM 407
Query: 544 APQLPGYSTQFLQETLEKYTYPRGTEWEKMI 636
P+ PGYST+ +E+++K+ YP G W+K++
Sbjct: 408 PPKDPGYSTEMKEESVKKHQYPDGEVWKKLL 438
>AF305057-2|AAG29536.1| 361|Homo sapiens RTS alpha protein.
Length = 361
Score = 288 bits (706), Expect = 2e-77
Identities = 123/211 (58%), Positives = 162/211 (76%)
Frame = +1
Query: 4 EDDYRRCSAVRRYIGDENVLMVDANQAWSVGQAIEWMKKLAPLKPMWIEEPTSPDDVLGH 183
+DD RRC +R IG E LM+DANQ W V +A+EWM KLA KP+WIEEPTSPDD+LGH
Sbjct: 146 QDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTSPDDILGH 205
Query: 184 ATISEALKPYGIGVATGEMCANRVLFKQFLQSGGMQYCQIDAARIGGVNEILAVYLMAEK 363
ATIS+AL P GIG+ATGE C NRV+FKQ LQ+ +Q+ QID+ R+G VNE L+V LMA+K
Sbjct: 206 ATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKK 265
Query: 364 LRVKVCPHAGGVGLCEMVQHLQFWDYASVSCTMEDRLIEYIDQQHEHFIDPCVVENAKYL 543
+ VCPHAGGVGLCE+VQHL +DY SVS ++E+R+ EY+D HEHF P +++ A Y+
Sbjct: 266 FEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVMIQRASYM 325
Query: 544 APQLPGYSTQFLQETLEKYTYPRGTEWEKMI 636
P+ PGYST+ +E+++K+ YP G W+K++
Sbjct: 326 PPKDPGYSTEMKEESVKKHQYPDGEVWKKLL 356
>AF305057-1|AAG29537.1| 416|Homo sapiens RTS beta protein.
Length = 416
Score = 288 bits (706), Expect = 2e-77
Identities = 123/211 (58%), Positives = 162/211 (76%)
Frame = +1
Query: 4 EDDYRRCSAVRRYIGDENVLMVDANQAWSVGQAIEWMKKLAPLKPMWIEEPTSPDDVLGH 183
+DD RRC +R IG E LM+DANQ W V +A+EWM KLA KP+WIEEPTSPDD+LGH
Sbjct: 201 QDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTSPDDILGH 260
Query: 184 ATISEALKPYGIGVATGEMCANRVLFKQFLQSGGMQYCQIDAARIGGVNEILAVYLMAEK 363
ATIS+AL P GIG+ATGE C NRV+FKQ LQ+ +Q+ QID+ R+G VNE L+V LMA+K
Sbjct: 261 ATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKK 320
Query: 364 LRVKVCPHAGGVGLCEMVQHLQFWDYASVSCTMEDRLIEYIDQQHEHFIDPCVVENAKYL 543
+ VCPHAGGVGLCE+VQHL +DY SVS ++E+R+ EY+D HEHF P +++ A Y+
Sbjct: 321 FEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVMIQRASYM 380
Query: 544 APQLPGYSTQFLQETLEKYTYPRGTEWEKMI 636
P+ PGYST+ +E+++K+ YP G W+K++
Sbjct: 381 PPKDPGYSTEMKEESVKKHQYPDGEVWKKLL 411
>AK127818-1|BAC87148.1| 474|Homo sapiens protein ( Homo sapiens
cDNA FLJ45920 fis, clone PLACE6003004, highly similar
to Homo sapiens rTS beta protein (HSRTSBETA). ).
Length = 474
Score = 252 bits (618), Expect = 8e-67
Identities = 113/211 (53%), Positives = 151/211 (71%)
Frame = +1
Query: 4 EDDYRRCSAVRRYIGDENVLMVDANQAWSVGQAIEWMKKLAPLKPMWIEEPTSPDDVLGH 183
+DD RRC +R IG E LM+DANQ W V +A+EWM KLA KP+WIEEPTSPDD+LGH
Sbjct: 273 QDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTSPDDILGH 332
Query: 184 ATISEALKPYGIGVATGEMCANRVLFKQFLQSGGMQYCQIDAARIGGVNEILAVYLMAEK 363
ATIS+ C NRV+FKQ LQ+ +Q+ QID+ R+G VNE L+V LMA+K
Sbjct: 333 ATISK--------------CHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKK 378
Query: 364 LRVKVCPHAGGVGLCEMVQHLQFWDYASVSCTMEDRLIEYIDQQHEHFIDPCVVENAKYL 543
+ VCPHAGGVGLCE+VQHL +DY SVS ++E+R+ EY+D HEHF P +++ A Y+
Sbjct: 379 FEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVMIQRASYM 438
Query: 544 APQLPGYSTQFLQETLEKYTYPRGTEWEKMI 636
P+ PGYST+ +E+++K+ YP G W+K++
Sbjct: 439 PPKDPGYSTEMKEESVKKHQYPDGEVWKKLL 469
>BC047602-1|AAH47602.1| 1884|Homo sapiens RTTN protein protein.
Length = 1884
Score = 30.3 bits (65), Expect = 7.8
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +1
Query: 337 LAVYLMAEKLRVKVCPHAGGVGLCEMVQHLQFWDYASV--SCTMEDRLIEYIDQQHEHFI 510
++ YL+ ++L +K CP GV L + H + V +CT +++L+ ID HF+
Sbjct: 753 MSFYLLNDRLSLKGCPGPCGVTLKSLAWHTALNRFLQVLPACTEDEKLL--ID--IIHFL 808
Query: 511 DPCVVENAKYLAPQLPGYSTQFL 579
+ + E K + +L + + L
Sbjct: 809 NKLIKEQRKNSSLELLNWILELL 831
>AY598745-1|AAT47519.1| 1068|Homo sapiens AF10 protein.
Length = 1068
Score = 30.3 bits (65), Expect = 7.8
Identities = 29/116 (25%), Positives = 56/116 (48%)
Frame = -1
Query: 368 LSFSAIRYTANISLTPPILAASI*QYCIPPLCRNCLKSTRLAHISPVATPIP*GFRASEI 189
LS S+ T++++ + +S Q P L RN + SPV + I +R
Sbjct: 493 LSVSSASPTSSVASAAGSITSSSLQKS-PTLLRNGSLQSLSVGSSPVGSEISMQYRHDG- 550
Query: 188 VACPKTSSGEVGSSIHIGFKGANFFIHSIAWPTLQAWLASTIKTFSSPIYRRTALH 21
ACP T+ E+ ++IH G +N ++++P + + S+ SS + ++++ H
Sbjct: 551 -ACPTTTFSELLNAIHNGIYNSNDV--AVSFPNVVSGSGSSTPVSSSHLPQQSSGH 603
>AL359697-2|CAH73411.1| 1068|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 1068
Score = 30.3 bits (65), Expect = 7.8
Identities = 29/116 (25%), Positives = 56/116 (48%)
Frame = -1
Query: 368 LSFSAIRYTANISLTPPILAASI*QYCIPPLCRNCLKSTRLAHISPVATPIP*GFRASEI 189
LS S+ T++++ + +S Q P L RN + SPV + I +R
Sbjct: 493 LSVSSASPTSSVASAAGSITSSSLQKS-PTLLRNGSLQSLSVGSSPVGSEISMQYRHDG- 550
Query: 188 VACPKTSSGEVGSSIHIGFKGANFFIHSIAWPTLQAWLASTIKTFSSPIYRRTALH 21
ACP T+ E+ ++IH G +N ++++P + + S+ SS + ++++ H
Sbjct: 551 -ACPTTTFSELLNAIHNGIYNSNDV--AVSFPNVVSGSGSSTPVSSSHLPQQSSGH 603
>AL358780-4|CAI13980.1| 1068|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 1068
Score = 30.3 bits (65), Expect = 7.8
Identities = 29/116 (25%), Positives = 56/116 (48%)
Frame = -1
Query: 368 LSFSAIRYTANISLTPPILAASI*QYCIPPLCRNCLKSTRLAHISPVATPIP*GFRASEI 189
LS S+ T++++ + +S Q P L RN + SPV + I +R
Sbjct: 493 LSVSSASPTSSVASAAGSITSSSLQKS-PTLLRNGSLQSLSVGSSPVGSEISMQYRHDG- 550
Query: 188 VACPKTSSGEVGSSIHIGFKGANFFIHSIAWPTLQAWLASTIKTFSSPIYRRTALH 21
ACP T+ E+ ++IH G +N ++++P + + S+ SS + ++++ H
Sbjct: 551 -ACPTTTFSELLNAIHNGIYNSNDV--AVSFPNVVSGSGSSTPVSSSHLPQQSSGH 603
>AL357372-2|CAI41349.1| 1068|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 1068
Score = 30.3 bits (65), Expect = 7.8
Identities = 29/116 (25%), Positives = 56/116 (48%)
Frame = -1
Query: 368 LSFSAIRYTANISLTPPILAASI*QYCIPPLCRNCLKSTRLAHISPVATPIP*GFRASEI 189
LS S+ T++++ + +S Q P L RN + SPV + I +R
Sbjct: 493 LSVSSASPTSSVASAAGSITSSSLQKS-PTLLRNGSLQSLSVGSSPVGSEISMQYRHDG- 550
Query: 188 VACPKTSSGEVGSSIHIGFKGANFFIHSIAWPTLQAWLASTIKTFSSPIYRRTALH 21
ACP T+ E+ ++IH G +N ++++P + + S+ SS + ++++ H
Sbjct: 551 -ACPTTTFSELLNAIHNGIYNSNDV--AVSFPNVVSGSGSSTPVSSSHLPQQSSGH 603
>AL161799-2|CAI39664.1| 1068|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 1068
Score = 30.3 bits (65), Expect = 7.8
Identities = 29/116 (25%), Positives = 56/116 (48%)
Frame = -1
Query: 368 LSFSAIRYTANISLTPPILAASI*QYCIPPLCRNCLKSTRLAHISPVATPIP*GFRASEI 189
LS S+ T++++ + +S Q P L RN + SPV + I +R
Sbjct: 493 LSVSSASPTSSVASAAGSITSSSLQKS-PTLLRNGSLQSLSVGSSPVGSEISMQYRHDG- 550
Query: 188 VACPKTSSGEVGSSIHIGFKGANFFIHSIAWPTLQAWLASTIKTFSSPIYRRTALH 21
ACP T+ E+ ++IH G +N ++++P + + S+ SS + ++++ H
Sbjct: 551 -ACPTTTFSELLNAIHNGIYNSNDV--AVSFPNVVSGSGSSTPVSSSHLPQQSSGH 603
>AK128137-1|BAC87292.1| 635|Homo sapiens protein ( Homo sapiens
cDNA FLJ46258 fis, clone TESTI4024245. ).
Length = 635
Score = 30.3 bits (65), Expect = 7.8
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +1
Query: 337 LAVYLMAEKLRVKVCPHAGGVGLCEMVQHLQFWDYASV--SCTMEDRLIEYIDQQHEHFI 510
++ YL+ ++L +K CP GV L + H + V +CT +++L+ ID HF+
Sbjct: 137 MSFYLLNDRLSLKGCPGPCGVTLKSLAWHTALNRFLQVLPACTEDEKLL--ID--IIHFL 192
Query: 511 DPCVVENAKYLAPQLPGYSTQFL 579
+ + E K + +L + + L
Sbjct: 193 NKLIKEQRKNSSLELLNWILELL 215
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,978,778
Number of Sequences: 237096
Number of extensions: 2917229
Number of successful extensions: 5915
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5915
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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