Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25o06
         (761 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80029-9|AAB37588.1|  459|Caenorhabditis elegans Hypothetical pr...    31   0.89 
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical...    31   1.2  
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical...    31   1.2  
Z69903-1|CAA93772.1|  137|Caenorhabditis elegans Hypothetical pr...    30   2.1  
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr...    29   2.7  
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion...    29   2.7  
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion...    29   2.7  
Z81030-13|CAB02705.2|  358|Caenorhabditis elegans Hypothetical p...    28   6.3  
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr...    28   6.3  
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch...    28   6.3  
U58737-2|AAM69081.1|  479|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U58737-1|ABC48238.1|  474|Caenorhabditis elegans Hypothetical pr...    28   6.3  
AL110484-12|CAB54403.1|   72|Caenorhabditis elegans Hypothetical...    28   8.3  

>U80029-9|AAB37588.1|  459|Caenorhabditis elegans Hypothetical
           protein T20D4.9 protein.
          Length = 459

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +1

Query: 535 KYLAPQLPGYSTQFLQETLEKYTYPRGTEWEKMIKEGIFPQPD 663
           KYLA ++PGY  +FL       T     +    I  GI P+ D
Sbjct: 195 KYLAKRIPGYEPEFLFSAFASNTENEAFKHNSAIYSGIVPRND 237


>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
           protein Y105E8A.24b protein.
          Length = 1127

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = -3

Query: 510 YKMLVLLINVLYEAILHR---TRHARVIPELKVLHHLTQTNSSGVWTYFYSK 364
           +K    + N + EA+  R    R ARVIP  +++  +T++  + +W+YF  K
Sbjct: 796 FKTRTDISNRIREAVKGRFRELRRARVIPLNRLVERITESRDADLWSYFDEK 847


>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
           protein Y105E8A.24a protein.
          Length = 1161

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = -3

Query: 510 YKMLVLLINVLYEAILHR---TRHARVIPELKVLHHLTQTNSSGVWTYFYSK 364
           +K    + N + EA+  R    R ARVIP  +++  +T++  + +W+YF  K
Sbjct: 796 FKTRTDISNRIREAVKGRFRELRRARVIPLNRLVERITESRDADLWSYFDEK 847


>Z69903-1|CAA93772.1|  137|Caenorhabditis elegans Hypothetical
           protein F46F2.3 protein.
          Length = 137

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +1

Query: 511 DPCVVENAKYLAPQLPGYSTQFLQETLEKY 600
           DPC    A Y  PQ P Y  Q+ Q   + +
Sbjct: 36  DPCAAARAPYYPPQQPAYQPQYQQPAYQPH 65


>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
            presynaptic activity protein.
          Length = 1409

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 418  QHLQFWDYASVSCTMEDRLIEYIDQQHEHFID 513
            Q+LQFW+ A V    ++R I  +DQ+    ID
Sbjct: 1088 QNLQFWENAFVDLVAQEREIVGMDQEPSEMID 1119


>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
            defective protein3, isoform b protein.
          Length = 1408

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 418  QHLQFWDYASVSCTMEDRLIEYIDQQHEHFID 513
            Q+LQFW+ A V    ++R I  +DQ+    ID
Sbjct: 1088 QNLQFWENAFVDLVAQEREIVGMDQEPSEMID 1119


>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
            defective protein3, isoform a protein.
          Length = 1409

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 418  QHLQFWDYASVSCTMEDRLIEYIDQQHEHFID 513
            Q+LQFW+ A V    ++R I  +DQ+    ID
Sbjct: 1088 QNLQFWENAFVDLVAQEREIVGMDQEPSEMID 1119


>Z81030-13|CAB02705.2|  358|Caenorhabditis elegans Hypothetical
           protein C01G10.3 protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -3

Query: 672 FGFVGLRENSFFDHLFPFRSTW-IRILFESLLQELC 568
           F  V L  N FF  LFP R  W + I F  LL  LC
Sbjct: 110 FQSVYLSINRFFAMLFPLRFNWLLSIKFTLLLHILC 145


>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical
           protein K12F2.1 protein.
          Length = 1969

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +1

Query: 34  RRYIGDENVLMVDAN-QAWSVGQAIEWMKKLAPLKPM 141
           RRY     +L+V  N +AW   +  EW K    +KPM
Sbjct: 816 RRYEQQTGLLVVQRNVRAWCTLRTWEWFKLFGKVKPM 852


>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain
           3 protein.
          Length = 1969

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +1

Query: 34  RRYIGDENVLMVDAN-QAWSVGQAIEWMKKLAPLKPM 141
           RRY     +L+V  N +AW   +  EW K    +KPM
Sbjct: 816 RRYEQQTGLLVVQRNVRAWCTLRTWEWFKLFGKVKPM 852


>U58737-2|AAM69081.1|  479|Caenorhabditis elegans Hypothetical
           protein ZK54.1a protein.
          Length = 479

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +1

Query: 43  IGDENVLMVDANQAWSVGQAIEWMKKLAPLKPMWIEEPTS 162
           IG+ NV+M     A+ +G AI W    A L+P W  E TS
Sbjct: 435 IGEWNVIMYIIISAYLLGAAIFWKFADATLQP-WAAEHTS 473


>U58737-1|ABC48238.1|  474|Caenorhabditis elegans Hypothetical
           protein ZK54.1b protein.
          Length = 474

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +1

Query: 43  IGDENVLMVDANQAWSVGQAIEWMKKLAPLKPMWIEEPTS 162
           IG+ NV+M     A+ +G AI W    A L+P W  E TS
Sbjct: 430 IGEWNVIMYIIISAYLLGAAIFWKFADATLQP-WAAEHTS 468


>AL110484-12|CAB54403.1|   72|Caenorhabditis elegans Hypothetical
           protein Y38E10A.12 protein.
          Length = 72

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +1

Query: 541 LAPQLPGYSTQFLQETLEKYTYPRGTEWEKMIKEGIFPQPDETEWA 678
           LA  L   S   ++E  + Y  P G     M+ +G+F  P    WA
Sbjct: 11  LALFLATVSAGIIRERRQAYYTPNGAVVNNMVSDGLFGGPTSLGWA 56


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,457,783
Number of Sequences: 27780
Number of extensions: 448562
Number of successful extensions: 1106
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)