Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25o06
         (761 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   4.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   5.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   7.1  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   7.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.4  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 622 IPFHVDTYTFRESLAGTVC 566
           + F + T   R+++AGT+C
Sbjct: 395 VXFRILTMPVRDAIAGTIC 413


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 87  ECGPSYRMDEKVSA 128
           ECGP+  +DEK  A
Sbjct: 172 ECGPAADVDEKTDA 185


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 570 TVPARDSRKVYVSTWNG 620
           TV A+DS  +    WNG
Sbjct: 57  TVQAKDSNVLAAKVWNG 73


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 469 DPPSYKTRSRNPRIEGVAPSHTN 401
           +PP + TRS   R+    P+  N
Sbjct: 612 EPPQWHTRSTEKRVSAGTPAAFN 634


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
 Frame = +1

Query: 121  LAPLKPMWIEEPTSPDDVLGHATISEALKPY----GIGVATGEMCAN 249
            L PL+P +    +SPD   G   ++ A+  Y    G G     +C+N
Sbjct: 891  LTPLQPRFYSISSSPDVHQGQIHLTVAVVQYKTQDGFGPIHYGVCSN 937


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,472
Number of Sequences: 438
Number of extensions: 5337
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)