Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25o05
(418 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC069235-1|AAH69235.1| 577|Homo sapiens THAP domain containing ... 40 0.003
AF258556-1|AAG23759.1| 577|Homo sapiens PP238 protein. 40 0.003
AC133528-4|AAY14918.1| 577|Homo sapiens unknown protein. 40 0.003
BC131722-1|AAI31723.1| 102|Homo sapiens THAP9 protein protein. 33 0.38
BC030058-1|AAH30058.1| 676|Homo sapiens TTF2 protein protein. 32 0.67
AL445231-3|CAH71961.1| 1162|Homo sapiens transcription terminati... 32 0.67
AL391476-7|CAI12738.1| 1162|Homo sapiens transcription terminati... 32 0.67
AF080255-1|AAD49435.1| 1162|Homo sapiens lodestar protein protein. 32 0.67
AF073771-1|AAC64044.1| 1162|Homo sapiens RNA polymerase II termi... 32 0.67
CR533485-1|CAG38516.1| 228|Homo sapiens DKFZP564I0422 protein. 32 0.88
BC008358-1|AAH08358.1| 228|Homo sapiens THAP domain containing,... 32 0.88
>BC069235-1|AAH69235.1| 577|Homo sapiens THAP domain containing 4
protein.
Length = 577
Score = 40.3 bits (90), Expect = 0.003
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +2
Query: 113 IGVHQF-LKDKKIGRL*LKAI*REKSTPTKSSRLCRKQFVESDYENISKYTGVKH*HKYL 289
+ H+F LKD K LKA+ R+ TPTK S LC + F + + ++ H+ L
Sbjct: 22 VSFHRFPLKDSKRLIQWLKAVQRDNWTPTKYSFLCSEHFTKDSFSK-----RLEDQHRLL 76
Query: 290 KKGAVPSIF 316
K AVPSIF
Sbjct: 77 KPTAVPSIF 85
>AF258556-1|AAG23759.1| 577|Homo sapiens PP238 protein.
Length = 577
Score = 40.3 bits (90), Expect = 0.003
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +2
Query: 113 IGVHQF-LKDKKIGRL*LKAI*REKSTPTKSSRLCRKQFVESDYENISKYTGVKH*HKYL 289
+ H+F LKD K LKA+ R+ TPTK S LC + F + + ++ H+ L
Sbjct: 22 VSFHRFPLKDSKRLIQWLKAVQRDNWTPTKYSFLCSEHFTKDSFSK-----RLEDQHRLL 76
Query: 290 KKGAVPSIF 316
K AVPSIF
Sbjct: 77 KPTAVPSIF 85
>AC133528-4|AAY14918.1| 577|Homo sapiens unknown protein.
Length = 577
Score = 40.3 bits (90), Expect = 0.003
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +2
Query: 113 IGVHQF-LKDKKIGRL*LKAI*REKSTPTKSSRLCRKQFVESDYENISKYTGVKH*HKYL 289
+ H+F LKD K LKA+ R+ TPTK S LC + F + + ++ H+ L
Sbjct: 22 VSFHRFPLKDSKRLIQWLKAVQRDNWTPTKYSFLCSEHFTKDSFSK-----RLEDQHRLL 76
Query: 290 KKGAVPSIF 316
K AVPSIF
Sbjct: 77 KPTAVPSIF 85
>BC131722-1|AAI31723.1| 102|Homo sapiens THAP9 protein protein.
Length = 102
Score = 33.1 bits (72), Expect = 0.38
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2
Query: 191 PTKSSRLCRKQFVESDYENISKYTGVKH*HKYLKKGAVPSIFSWNMK 331
P + LC K F ESD+E+ G++ + LKKGAVPS+ + M+
Sbjct: 55 PGPGAILCSKHFQESDFESY----GIR---RKLKKGAVPSVSLYKMR 94
>BC030058-1|AAH30058.1| 676|Homo sapiens TTF2 protein protein.
Length = 676
Score = 32.3 bits (70), Expect = 0.67
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +1
Query: 7 RWCALFP*HSIFVLEFLIKNYFKHNDALF--CANMLRNWSTSIPEGQEN--WKTVIKGHL 174
RWC P E + N +H F +N LRN + + QE WK +IKG
Sbjct: 87 RWCGSIPWQDPDSKEHSVSNKSQHASETFHHSSNWLRNPFKVLDKNQEPALWKQLIKGEG 146
Query: 175 TRKKYSHKKFE 207
KK K+ E
Sbjct: 147 EEKKADKKQRE 157
>AL445231-3|CAH71961.1| 1162|Homo sapiens transcription termination
factor, RNA polymerase II protein.
Length = 1162
Score = 32.3 bits (70), Expect = 0.67
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +1
Query: 7 RWCALFP*HSIFVLEFLIKNYFKHNDALF--CANMLRNWSTSIPEGQEN--WKTVIKGHL 174
RWC P E + N +H F +N LRN + + QE WK +IKG
Sbjct: 87 RWCGSIPWQDPDSKEHSVSNKSQHASETFHHSSNWLRNPFKVLDKNQEPALWKQLIKGEG 146
Query: 175 TRKKYSHKKFE 207
KK K+ E
Sbjct: 147 EEKKADKKQRE 157
>AL391476-7|CAI12738.1| 1162|Homo sapiens transcription termination
factor, RNA polymerase II protein.
Length = 1162
Score = 32.3 bits (70), Expect = 0.67
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +1
Query: 7 RWCALFP*HSIFVLEFLIKNYFKHNDALF--CANMLRNWSTSIPEGQEN--WKTVIKGHL 174
RWC P E + N +H F +N LRN + + QE WK +IKG
Sbjct: 87 RWCGSIPWQDPDSKEHSVSNKSQHASETFHHSSNWLRNPFKVLDKNQEPALWKQLIKGEG 146
Query: 175 TRKKYSHKKFE 207
KK K+ E
Sbjct: 147 EEKKADKKQRE 157
>AF080255-1|AAD49435.1| 1162|Homo sapiens lodestar protein protein.
Length = 1162
Score = 32.3 bits (70), Expect = 0.67
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +1
Query: 7 RWCALFP*HSIFVLEFLIKNYFKHNDALF--CANMLRNWSTSIPEGQEN--WKTVIKGHL 174
RWC P E + N +H F +N LRN + + QE WK +IKG
Sbjct: 87 RWCGSIPWQDPDSKEHSVSNKSQHASETFHHSSNWLRNPFKVLDKNQEPALWKQLIKGEG 146
Query: 175 TRKKYSHKKFE 207
KK K+ E
Sbjct: 147 EEKKADKKQRE 157
>AF073771-1|AAC64044.1| 1162|Homo sapiens RNA polymerase II
termination factor protein.
Length = 1162
Score = 32.3 bits (70), Expect = 0.67
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +1
Query: 7 RWCALFP*HSIFVLEFLIKNYFKHNDALF--CANMLRNWSTSIPEGQEN--WKTVIKGHL 174
RWC P E + N +H F +N LRN + + QE WK +IKG
Sbjct: 87 RWCGSIPWQDPDSKEHSVSNKSQHASETFHHSSNWLRNPFKVLDKNQEPALWKQLIKGEG 146
Query: 175 TRKKYSHKKFE 207
KK K+ E
Sbjct: 147 EEKKADKKQRE 157
>CR533485-1|CAG38516.1| 228|Homo sapiens DKFZP564I0422 protein.
Length = 228
Score = 31.9 bits (69), Expect = 0.88
Identities = 26/85 (30%), Positives = 41/85 (48%)
Frame = +2
Query: 113 IGVHQFLKDKKIGRL*LKAI*REKSTPTKSSRLCRKQFVESDYENISKYTGVKH*HKYLK 292
I H+F D K + ++ + R+ P K + LC K F S ++ TG + LK
Sbjct: 20 ISFHRFPLDPKRRKEWVRLVRRKNFVPGKHTFLCSKHFEASCFD----LTGQT---RRLK 72
Query: 293 KGAVPSIFSWNMKPVSEETKSREVM 367
AVP+IF + S + KSR ++
Sbjct: 73 MDAVPTIFDFCTHIKSMKLKSRNLL 97
>BC008358-1|AAH08358.1| 228|Homo sapiens THAP domain containing,
apoptosis associated protein 2 protein.
Length = 228
Score = 31.9 bits (69), Expect = 0.88
Identities = 26/85 (30%), Positives = 41/85 (48%)
Frame = +2
Query: 113 IGVHQFLKDKKIGRL*LKAI*REKSTPTKSSRLCRKQFVESDYENISKYTGVKH*HKYLK 292
I H+F D K + ++ + R+ P K + LC K F S ++ TG + LK
Sbjct: 20 ISFHRFPLDPKRRKEWVRLVRRKNFVPGKHTFLCSKHFEASCFD----LTGQT---RRLK 72
Query: 293 KGAVPSIFSWNMKPVSEETKSREVM 367
AVP+IF + S + KSR ++
Sbjct: 73 MDAVPTIFDFCTHIKSMKLKSRNLL 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,888,139
Number of Sequences: 237096
Number of extensions: 1151828
Number of successful extensions: 1511
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1505
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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