Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25o05
         (418 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   2.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   2.4  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   7.4  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   7.4  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    20   9.7  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 179 EKSTPTKSSRLCRKQFVESDYENIS 253
           E   P+    +C K+FV+    N+S
Sbjct: 329 ENVIPSNEELICDKRFVDESANNLS 353


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 179 EKSTPTKSSRLCRKQFVESDYENIS 253
           E   P+    +C K+FV+    N+S
Sbjct: 344 ENVIPSNEELICDKRFVDESANNLS 368


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 3   WALVCIVPITFNICIGIF 56
           W  +C    T  IC+G+F
Sbjct: 490 WWKICWTITTPAICVGVF 507


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 3   WALVCIVPITFNICIGIF 56
           W  +C    T  IC+G+F
Sbjct: 543 WWKICWTITTPAICVGVF 560


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/31 (25%), Positives = 14/31 (45%)
 Frame = +2

Query: 11  GVHCSHNIQYLYWNF*LKIILSTMTRCFVPI 103
           G+ C   +   +W+F +  IL       +PI
Sbjct: 384 GIQCLTVVCLAFWSFIVSTILLWFINKIIPI 414


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,694
Number of Sequences: 438
Number of extensions: 2591
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)