Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25o04
(699 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 2.8
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 22 6.4
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 8.5
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 8.5
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 8.5
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 8.5
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 8.5
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 8.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 8.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 8.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 8.5
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 8.5
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.0 bits (47), Expect = 2.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 288 YSNYNKLHSTRIYNLNNHGGINSR 217
YSNYN ++ YN NN+ N +
Sbjct: 324 YSNYNNYNN---YNNNNYNNYNKK 344
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1
Query: 535 PTVAGATSSSITISRSHL 588
PT +T++S TIS+ H+
Sbjct: 386 PTTEPSTTTSTTISQKHI 403
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 288 YSNYNKLHSTRIYNLNNHGGINSRQ 214
YSNYN ++ N NN+ N ++
Sbjct: 91 YSNYNNYNNNYNNNYNNNYNNNYKK 115
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 288 YSNYNKLHSTRIYNLNNHGGINSRQ 214
YSNYN ++ N NN+ N ++
Sbjct: 91 YSNYNNYNNNYNNNYNNNYNNNYKK 115
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 288 YSNYNKLHSTRIYNLN 241
Y+NYN + YN+N
Sbjct: 91 YNNYNNNYKPLYYNIN 106
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 288 YSNYNKLHSTRIYNLN 241
Y+NYN + YN+N
Sbjct: 91 YNNYNNNYKPLYYNIN 106
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 288 YSNYNKLHSTRIYNLN 241
Y+NYN + YN+N
Sbjct: 91 YNNYNNNYKPLYYNIN 106
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 288 YSNYNKLHSTRIYNLN 241
Y+NYN + YN+N
Sbjct: 91 YNNYNNNYKPLYYNIN 106
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 288 YSNYNKLHSTRIYNLN 241
Y+NYN + YN+N
Sbjct: 324 YNNYNNNYKPLYYNIN 339
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 288 YSNYNKLHSTRIYNLN 241
Y+NYN + YN+N
Sbjct: 324 YNNYNNNYKPLYYNIN 339
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 288 YSNYNKLHSTRIYNLN 241
Y+NYN + YN+N
Sbjct: 324 YNNYNNNYKPLYYNIN 339
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 288 YSNYNKLHSTRIYNLN 241
Y+NYN + YN+N
Sbjct: 313 YNNYNNNYKPLYYNIN 328
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,186
Number of Sequences: 438
Number of extensions: 4153
Number of successful extensions: 30
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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