Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25o01
(701 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 31 0.16
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 31 0.21
SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces p... 30 0.28
SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 29 0.85
SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces po... 29 0.85
SPBC17A3.03c |||phosphoprotein phosphatase |Schizosaccharomyces ... 27 2.6
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 27 3.4
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 4.5
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 26 6.0
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein... 25 7.9
SPBC2A9.02 |||NAD dependent epimerase/dehydratase family protein... 25 7.9
SPBC3D6.02 |but2||But2 family protein But2 |Schizosaccharomyces ... 25 7.9
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 25 7.9
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 25 7.9
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 25 7.9
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 31.1 bits (67), Expect = 0.16
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Frame = -3
Query: 690 VPLGSSLISLPSTV-GSSDRIVTIADEDEVS----AETYSLPSEGEASFATTAVVEIAAS 526
+P+ SSL + S+V SS +V+ + VS A + S P +S +T ++
Sbjct: 657 IPISSSLSTYSSSVIPSSSTLVSSSSSLIVSSSPVASSSSSPIPSSSSLVSTYSASLSNI 716
Query: 525 VIKSTTGPLLDISTVAPATL-VDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSFQRL 349
S + + S+ P ++ L++ S+ L S++T +SA T + ++S+
Sbjct: 717 THSSLSLTAMSSSSAIPTSVNSSTLITASSSNTLLSSITSSSAIVSSTTVSNISSNLPSA 776
Query: 348 T 346
T
Sbjct: 777 T 777
Score = 29.5 bits (63), Expect = 0.49
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 524 TDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVTIRSDEPTV 655
TD+ STTA+ ++ S S S +S+ TS S++I S P V
Sbjct: 862 TDSVTSTTALTSQGPSSSVVSSSLSSTTSLSTSIPVTSSVAPAV 905
Score = 27.5 bits (58), Expect = 2.0
Identities = 25/117 (21%), Positives = 43/117 (36%)
Frame = +2
Query: 281 VDSEASETALPASDAEKSETNTVSLWNDDVTPSKNVKSVAADVSVTADGNXXXXXXXXXX 460
V S SET+ S T+ S W + + S SVAA V+ T+ +
Sbjct: 905 VTSTGSETSSVVGSGTDSATS--SSWTAETSSSAITSSVAASVTPTSSSSASSWSSSSEV 962
Query: 461 XXXXXXXXXXISSKGPVVDLITDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVT 631
S+ ++ ++ S+ A + S + S SS+S++ T
Sbjct: 963 DPSTAASATGSSTSSIATASVSGSSTSSVATASATDSSTSSIAAASVTGSSTSSVAT 1019
Score = 27.1 bits (57), Expect = 2.6
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 494 SSKGPVVDLITDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVTIRSDEPT 652
SS+G ++ + A++ T+ ++ +S S S +S + + VT SDEPT
Sbjct: 337 SSQG--LESTSSIALNPTSSISSTSSSSSTSSAISTISQDHTKTVTSVSDEPT 387
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 30.7 bits (66), Expect = 0.21
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = -3
Query: 555 TTAVVEIAASVIKSTTGPLLDISTVAPATLVDELVSVST---VAVLPSAVTETSAATDLT 385
TTAV E ++S +T +STV P + V + V+T V+ SA T T+++T
Sbjct: 1395 TTAVTETSSSGYYTTIVSSTVVSTVVPGSTVYPVTHVTTTTGVSGESSAFTYTTSSTQYE 1454
Query: 384 FLEGVTSSFQRLTVLVS 334
VT+S+ +V S
Sbjct: 1455 PSTVVTTSYYTTSVYTS 1471
Score = 27.5 bits (58), Expect = 2.0
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = -3
Query: 654 TVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKSTTGPLLDISTVAP 475
T G+ ++ T + + T + +E + + T A ++TT + +T A
Sbjct: 1319 TAGTETQVTTATEVQPTTGATGTAGTETQVTTGTETQATTATET-QATTATEVQTTTGAT 1377
Query: 474 ATLVDELVSVSTVAVLPS-AVTETSAA 397
T E + V P+ AVTETS++
Sbjct: 1378 GTAGTETQVTTATEVQPTTAVTETSSS 1404
Score = 27.1 bits (57), Expect = 2.6
Identities = 22/85 (25%), Positives = 37/85 (43%)
Frame = -3
Query: 609 EVSAETYSLPSEGEASFATTAVVEIAASVIKSTTGPLLDISTVAPATLVDELVSVSTVAV 430
EV T + + G + TTA E+ + + T +T+ +T+V +V STV
Sbjct: 1369 EVQTTTGATGTAGTETQVTTAT-EVQPTTAVTETSSSGYYTTIVSSTVVSTVVPGSTVYP 1427
Query: 429 LPSAVTETSAATDLTFLEGVTSSFQ 355
+ T T + + + TSS Q
Sbjct: 1428 VTHVTTTTGVSGESSAFTYTTSSTQ 1452
Score = 25.8 bits (54), Expect = 6.0
Identities = 21/102 (20%), Positives = 37/102 (36%)
Frame = -3
Query: 678 SSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKSTTGPL 499
+S +++ T G++ T+ + + LP+ G A T A+ ++ TTG
Sbjct: 1117 TSTVTVTPT-GTATGTTTVVINTPTTTGSEVLPTTGATGTAGTETQLTTATEVQPTTGAT 1175
Query: 498 LDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEG 373
T T E + + + TE T T G
Sbjct: 1176 GTAGTETQVTTGTETQATTATETQATTATEVQTTTGATGTAG 1217
>SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 417
Score = 30.3 bits (65), Expect = 0.28
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 497 SKGPVVDLITDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVT 631
S VVD T AA S++ + + + SE S+ TSS++A T
Sbjct: 109 SSSAVVDSATSAAASSSVIPTSSSVVASSSEVASSTTSSAAASAT 153
>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1842
Score = 28.7 bits (61), Expect = 0.85
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -3
Query: 615 EDEVSAETYSLPSEGEASFATTAVVEIAASVIKSTTGPLLDISTVAP-ATLVDE 457
EDEV+ E P+E AS ++T VE AA+ + T T AP A L DE
Sbjct: 94 EDEVADE----PAEAPASTSSTPKVETAAAAAPAATPAPAPAQTSAPAAALPDE 143
>SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 547
Score = 28.7 bits (61), Expect = 0.85
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 284 DSEASETALPASDAEKSETNTVSLWNDDVTPSKNVKSVAADVSVTADGN 430
DSE++ LP D+ + LWN D K+V+ ++ + + A GN
Sbjct: 182 DSESTPILLPLIDSLNHKPKQPILWNSDFQDEKSVQLISQE--LVAKGN 228
>SPBC17A3.03c |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 263
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 566 ASPSEGSEYVSADTSSSSAIVTIRSDEPTVDGKLINE 676
+S ++ Y+S D+SS A V + S+ PTV +NE
Sbjct: 221 SSLNDLKRYIS-DSSSELADVVLSSESPTVQAATVNE 256
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 26.6 bits (56), Expect = 3.4
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -3
Query: 651 VGSSDRIVTIADEDEVSAETYSLPSEGEAS--FATTAVVEIA-ASVIKSTTGPL-LDIST 484
+ +DRI+ I EDE+ LPSE + F+ T ++ + I GPL +++ +
Sbjct: 242 IDEADRILEIGFEDEMRQIMKILPSENRQTLLFSATQTTKVEDLARISLKPGPLYVNVDS 301
Query: 483 VAPATLVDEL 454
P + V+ L
Sbjct: 302 GKPTSTVEGL 311
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.2 bits (55), Expect = 4.5
Identities = 24/106 (22%), Positives = 47/106 (44%)
Frame = -3
Query: 678 SSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKSTTGPL 499
+S S+P T S++R T + + S + SFA+ + + S+T
Sbjct: 634 TSSTSIPLT--STNRTSTTFTSSTSISTSSSSTATSSTSFASESSSFYSNVTTSSSTVST 691
Query: 498 LDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSS 361
+T P+T ++ S+++ +P+ TE A+ + E T+S
Sbjct: 692 PPPTTSFPSTFTTSFITSSSLSSIPNNSTEVKTASTSSGTEIKTAS 737
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = +2
Query: 491 ISSKGPVVDLITDAAISTTAVVAKDASPSEGSEYVSADTSSSSA 622
++ G + ++ +++S+T + +SPS S + SSSS+
Sbjct: 117 LTGNGVLQTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSS 160
>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 715
Score = 25.4 bits (53), Expect = 7.9
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -3
Query: 690 VPLGSSLISLPS-TVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAAS 526
V + SS ++PS TV SSD++ + ET S PS+ +S T V ++ S
Sbjct: 568 VSVFSSPFNVPSFTVSSSDQVQKKKGNVPNAIETDSSPSDTISSSPTVRAVNLSPS 623
>SPBC2A9.02 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 25.4 bits (53), Expect = 7.9
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = -3
Query: 570 EASFATTAVVEIAASVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATD 391
EA V+E V++ T PL+ S A + +L + + P + T
Sbjct: 82 EACKLDARVIEAIGEVLRGTERPLITTSVTAVLSSNGKLGTEISEVPQPPIPRQLGEVTT 141
Query: 390 LTFL-EGVTSSFQRL 349
L F +GV +S RL
Sbjct: 142 LKFASQGVRASILRL 156
>SPBC3D6.02 |but2||But2 family protein But2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 390
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 484 SRNIK*RPSRGFDHRCCNFNYSSSSKR 564
S +I + SR F H NFN+S+ +KR
Sbjct: 217 SADIPAKSSRLFPHGIYNFNFSAPNKR 243
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7
domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1811
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 521 ITDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVTIRSDE 646
+TD I T + V+ + +GS V + S S I + SDE
Sbjct: 1 MTDLEIETVSRVSSNPDEVKGSSVVEEEPDSESTIKSRVSDE 42
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 494 SSKGPVVDLITDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVTIRSDEPTVDGK 664
++KG ++ AA S++AVV+ S + S +S++S+ + +V GK
Sbjct: 240 ANKGVSTPAVSSAAASSSAVVSSVVSSATSVAASSTISSATSSSASASPTSSSVSGK 296
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 25.4 bits (53), Expect = 7.9
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 497 SKGPVVDLITDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVTIRSDEP 649
+KG + L T+ +TT S S S SA +SSSS+ +P
Sbjct: 281 TKGVMEALSTNDTTNTTDDATNTTSDSSSSSSASASSSSSSSSAASLVSQP 331
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,054,654
Number of Sequences: 5004
Number of extensions: 32913
Number of successful extensions: 165
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 325165428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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