Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25o01
(701 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot... 36 0.14
AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein. 36 0.14
AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein. 36 0.14
AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein. 36 0.14
X58521-1|CAA41411.1| 522|Homo sapiens nucleoporin p62 protein. 34 0.43
BC101107-1|AAI01108.1| 522|Homo sapiens nucleoporin 62kDa protein. 34 0.43
BC101106-1|AAI01107.1| 522|Homo sapiens nucleoporin 62kDa protein. 34 0.43
BC101105-1|AAI01106.1| 522|Homo sapiens nucleoporin 62kDa protein. 34 0.43
BC095410-1|AAH95410.1| 522|Homo sapiens nucleoporin 62kDa protein. 34 0.43
BC003663-1|AAH03663.1| 522|Homo sapiens nucleoporin 62kDa protein. 34 0.43
X79198-1|CAA55790.1| 1938|Homo sapiens host cell factor protein. 33 0.75
CR541721-1|CAG46522.1| 522|Homo sapiens NUP62 protein. 33 0.75
BC101104-1|AAI01105.1| 522|Homo sapiens nucleoporin 62kDa protein. 33 0.75
BC050717-1|AAH50717.1| 522|Homo sapiens nucleoporin 62kDa protein. 33 0.75
BC014842-1|AAH14842.1| 522|Homo sapiens nucleoporin 62kDa protein. 33 0.75
AF007197-1|AAB84381.1| 335|Homo sapiens mucin protein. 30 9.2
AF007193-1|AAC02271.1| 441|Homo sapiens mucin protein. 30 9.2
>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
protein.
Length = 1217
Score = 35.9 bits (79), Expect = 0.14
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 4/120 (3%)
Frame = -3
Query: 690 VPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKST 511
+P S PS+VG+S + T D + + +LP+ ++ ++ S + T
Sbjct: 378 IPTTSLRTLTPSSVGTSTSLTTTTDFPSIPTDISTLPTRTHIISSSPSIQSTETSSLVGT 437
Query: 510 TGPLLDISTVAPATLVDELVSVS----TVAVLPSAVTETSAATDLTFLEGVTSSFQRLTV 343
T P + STV + E +S ++ V+P T+T LT G +S TV
Sbjct: 438 TSPTM--STVRMTLRITENTPISSFSTSIVVIPETPTQTPPV--LTSATGTQTSPAPTTV 493
>AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein.
Length = 957
Score = 35.9 bits (79), Expect = 0.14
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 4/120 (3%)
Frame = -3
Query: 690 VPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKST 511
+P S PS+VG+S + T D + + +LP+ ++ ++ S + T
Sbjct: 378 IPTTSLRTLTPSSVGTSTSLTTTTDFPSIPTDISTLPTRTHIISSSPSIQSTETSSLVGT 437
Query: 510 TGPLLDISTVAPATLVDELVSVS----TVAVLPSAVTETSAATDLTFLEGVTSSFQRLTV 343
T P + STV + E +S ++ V+P T+T LT G +S TV
Sbjct: 438 TSPTM--STVRMTLRITENTPISSFSTSIVVIPETPTQTPPV--LTSATGTQTSPAPTTV 493
>AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein.
Length = 877
Score = 35.9 bits (79), Expect = 0.14
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 4/120 (3%)
Frame = -3
Query: 690 VPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKST 511
+P S PS+VG+S + T D + + +LP+ ++ ++ S + T
Sbjct: 38 IPTTSLRTLTPSSVGTSTSLTTTTDFPSIPTDISTLPTRTHIISSSPSIQSTETSSLVGT 97
Query: 510 TGPLLDISTVAPATLVDELVSVS----TVAVLPSAVTETSAATDLTFLEGVTSSFQRLTV 343
T P + STV + E +S ++ V+P T+T LT G +S TV
Sbjct: 98 TSPTM--STVRMTLRITENTPISSFSTSIVVIPETPTQTPPV--LTSATGTQTSPAPTTV 153
>AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 35.9 bits (79), Expect = 0.14
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 4/120 (3%)
Frame = -3
Query: 690 VPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKST 511
+P S PS+VG+S + T D + + +LP+ ++ ++ S + T
Sbjct: 38 IPTTSLRTLTPSSVGTSTSLTTTTDFPSIPTDISTLPTRTHIISSSPSIQSTETSSLVGT 97
Query: 510 TGPLLDISTVAPATLVDELVSVS----TVAVLPSAVTETSAATDLTFLEGVTSSFQRLTV 343
T P + STV + E +S ++ V+P T+T LT G +S TV
Sbjct: 98 TSPTM--STVRMTLRITENTPISSFSTSIVVIPETPTQTPPV--LTSATGTQTSPAPTTV 153
>X58521-1|CAA41411.1| 522|Homo sapiens nucleoporin p62 protein.
Length = 522
Score = 34.3 bits (75), Expect = 0.43
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = -3
Query: 699 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEAS-----FATTAVVEI 535
SL + ++ S +T S VT A + +SL + G AS +T A
Sbjct: 220 SLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATA 279
Query: 534 AASVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLE 376
+ STTG L++ +APA + + T P A +A++ +T+ +
Sbjct: 280 TTTTSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQ 332
>BC101107-1|AAI01108.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 34.3 bits (75), Expect = 0.43
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = -3
Query: 699 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEAS-----FATTAVVEI 535
SL + ++ S +T S VT A + +SL + G AS +T A
Sbjct: 220 SLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATA 279
Query: 534 AASVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLE 376
+ STTG L++ +APA + + T P A +A++ +T+ +
Sbjct: 280 TTTTSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQ 332
>BC101106-1|AAI01107.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 34.3 bits (75), Expect = 0.43
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = -3
Query: 699 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEAS-----FATTAVVEI 535
SL + ++ S +T S VT A + +SL + G AS +T A
Sbjct: 220 SLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATA 279
Query: 534 AASVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLE 376
+ STTG L++ +APA + + T P A +A++ +T+ +
Sbjct: 280 TTTTSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQ 332
>BC101105-1|AAI01106.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 34.3 bits (75), Expect = 0.43
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = -3
Query: 699 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEAS-----FATTAVVEI 535
SL + ++ S +T S VT A + +SL + G AS +T A
Sbjct: 220 SLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATA 279
Query: 534 AASVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLE 376
+ STTG L++ +APA + + T P A +A++ +T+ +
Sbjct: 280 TTTTSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQ 332
>BC095410-1|AAH95410.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 34.3 bits (75), Expect = 0.43
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = -3
Query: 699 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEAS-----FATTAVVEI 535
SL + ++ S +T S VT A + +SL + G AS +T A
Sbjct: 220 SLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATA 279
Query: 534 AASVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLE 376
+ STTG L++ +APA + + T P A +A++ +T+ +
Sbjct: 280 TTTTSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQ 332
>BC003663-1|AAH03663.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 34.3 bits (75), Expect = 0.43
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = -3
Query: 699 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEAS-----FATTAVVEI 535
SL + ++ S +T S VT A + +SL + G AS +T A
Sbjct: 220 SLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATA 279
Query: 534 AASVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLE 376
+ STTG L++ +APA + + T P A +A++ +T+ +
Sbjct: 280 TTTTSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQ 332
>X79198-1|CAA55790.1| 1938|Homo sapiens host cell factor protein.
Length = 1938
Score = 33.5 bits (73), Expect = 0.75
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = -3
Query: 636 RIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASV-IKSTTGPLLDISTVAPATLVD 460
R+VT V +L +G T V S + G S P T +
Sbjct: 758 RLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGGHSTSASLATPITTLG 817
Query: 459 ELVSVSTVAVLPSAVTETSAATDLTFLEGVTS 364
+ ++S+ + P+A+T ++A T LT G+T+
Sbjct: 818 TIATLSSQVINPTAITVSAAQTTLTAAGGLTT 849
>CR541721-1|CAG46522.1| 522|Homo sapiens NUP62 protein.
Length = 522
Score = 33.5 bits (73), Expect = 0.75
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = -3
Query: 699 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVI 520
SL + ++ S +T S VT A + +SL + G AS +T A +
Sbjct: 220 SLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATA 279
Query: 519 -----KSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLE 376
STTG L++ +APA + + T P A +A++ +T+ +
Sbjct: 280 TTTSSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQ 332
>BC101104-1|AAI01105.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 33.5 bits (73), Expect = 0.75
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = -3
Query: 699 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVI 520
SL + ++ S +T S VT A + +SL + G AS +T A +
Sbjct: 220 SLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATA 279
Query: 519 -----KSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLE 376
STTG L++ +APA + + T P A +A++ +T+ +
Sbjct: 280 TTTSSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQ 332
>BC050717-1|AAH50717.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 33.5 bits (73), Expect = 0.75
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = -3
Query: 699 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVI 520
SL + ++ S +T S VT A + +SL + G AS +T A +
Sbjct: 220 SLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATA 279
Query: 519 -----KSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLE 376
STTG L++ +APA + + T P A +A++ +T+ +
Sbjct: 280 TTTSSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQ 332
>BC014842-1|AAH14842.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 33.5 bits (73), Expect = 0.75
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = -3
Query: 699 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVI 520
SL + ++ S +T S VT A + +SL + G AS +T A +
Sbjct: 220 SLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATA 279
Query: 519 -----KSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLE 376
STTG L++ +APA + + T P A +A++ +T+ +
Sbjct: 280 TTTSSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQ 332
>AF007197-1|AAB84381.1| 335|Homo sapiens mucin protein.
Length = 335
Score = 29.9 bits (64), Expect = 9.2
Identities = 25/114 (21%), Positives = 46/114 (40%)
Frame = -3
Query: 699 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVI 520
S + G+ + S+ +S + T+ ++S ++ T+++
Sbjct: 155 STVATTGTGQTTFTSSTATSPKTTTLTPTSDISTGSFKTAVSSTPPI-TSSITSTYTVTS 213
Query: 519 KSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSF 358
+TT PL A TL SVS+ +PS TS T+ T L + ++F
Sbjct: 214 MTTTTPL---GPTATNTLPSFTSSVSSSTPVPSTEAITSGTTNTTPLSTLVTTF 264
>AF007193-1|AAC02271.1| 441|Homo sapiens mucin protein.
Length = 441
Score = 29.9 bits (64), Expect = 9.2
Identities = 25/114 (21%), Positives = 46/114 (40%)
Frame = -3
Query: 699 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVI 520
S + G+ + S+ +S + T+ ++S ++ T+++
Sbjct: 189 STVATTGTGQTTFTSSTATSPKTTTLTPTSDISTGSFKTAVSSTPPI-TSSITSTYTVTS 247
Query: 519 KSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSF 358
+TT PL A TL SVS+ +PS TS T+ T L + ++F
Sbjct: 248 MTTTTPL---GPTATNTLPSFTSSVSSSTPVPSTEAITSGTTNTTPLSTLVTTF 298
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,786,912
Number of Sequences: 237096
Number of extensions: 1072587
Number of successful extensions: 2802
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2792
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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