Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25n02
(694 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 61 1e-11
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 60 3e-11
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 47 2e-07
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 45 6e-07
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 29 0.032
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 26 0.39
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 25 0.68
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 23 2.1
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 23 2.1
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.1
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 2.1
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 2.1
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 23 2.1
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 23 3.6
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 23 3.6
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 23 3.6
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 23 3.6
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 23 3.6
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 3.6
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 23 3.6
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 6.4
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 8.4
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 8.4
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 8.4
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 8.4
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.4
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 8.4
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 60.9 bits (141), Expect = 1e-11
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 10/128 (7%)
Frame = +2
Query: 215 NIGISAHIDSGKTTLTERILFYTGRID---------QMHEV-KGKDNVGAVMDSMELERQ 364
NI + H+DSGK+T T +++ G ID + E+ KG V+D ++ ER+
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 365 RGITIQSAATYTIWKEHNINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLT 544
RGITI A ++ + IID PGH DF + D A+L++ + G ++
Sbjct: 69 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 128
Query: 545 VNRQMKRY 568
N Q + +
Sbjct: 129 KNGQTREH 136
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 59.7 bits (138), Expect = 3e-11
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 10/128 (7%)
Frame = +2
Query: 215 NIGISAHIDSGKTTLTERILFYTGRID---------QMHEV-KGKDNVGAVMDSMELERQ 364
NI + H+DSGK+T T +++ G ID + E+ KG V+D ++ ER+
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 365 RGITIQSAATYTIWKEHNINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLT 544
RGITI A ++ + IID PGH DF + D A+L++ + G ++
Sbjct: 69 RGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGIS 128
Query: 545 VNRQMKRY 568
N Q + +
Sbjct: 129 KNGQTREH 136
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 46.8 bits (106), Expect = 2e-07
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +2
Query: 398 TIWKEHNINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVP 577
T+ + +DTPGH F R + D +LV+ + GV+ QTL K VP
Sbjct: 188 TLESGERVTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKEQTLQSIEMAKDAKVP 247
Query: 578 CLAFINKLDR 607
+ INK+D+
Sbjct: 248 IIVAINKIDK 257
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 45.2 bits (102), Expect = 6e-07
Identities = 24/78 (30%), Positives = 40/78 (51%)
Frame = +2
Query: 335 VMDSMELERQRGITIQSAATYTIWKEHNINIIDTPGHVDFTVEVERALRVLDGAILVLCS 514
V+D ++ ER+RGITI A ++ + IID PGH DF + D A+L++ +
Sbjct: 2 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 61
Query: 515 VGGVQSQTLTVNRQMKRY 568
G ++ N Q + +
Sbjct: 62 GTGEFEAGISKNGQTREH 79
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 29.5 bits (63), Expect = 0.032
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +2
Query: 401 IWK----EHNINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRY 568
+WK ++ + IID PGH DF + D A+L++ + G ++ N Q + +
Sbjct: 4 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 63
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 25.8 bits (54), Expect = 0.39
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 325 CWCCYGLNGVGTS 363
CWCC L G G+S
Sbjct: 13 CWCCDNLGGPGSS 25
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 25.0 bits (52), Expect = 0.68
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +2
Query: 35 TVIIKLELFII*YFKMTISYAFRLINA-LKNTKKSSVFQIELQKYSSHVKY---AEHKPL 202
TV++KL L + + + N L++ + FQ + +Y + +EH L
Sbjct: 45 TVVVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFQWDPAEYGGVTELYVPSEHIWL 104
Query: 203 ENIRNIGISAHIDSGKTTLTERILFYTGRI 292
+I +A + G TT+T+ IL YTG++
Sbjct: 105 PDIVLYN-NADGEYGVTTMTKAILHYTGKV 133
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -3
Query: 248 FQSLCELIYQYFEYFPMVCVL 186
F+S CE+ +YF + C +
Sbjct: 141 FKSSCEIDVRYFPFDQQTCFM 161
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 23.4 bits (48), Expect = 2.1
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 210 IFSNGLCSAYLTCDEYFCNS 151
IF LC +LTCD C +
Sbjct: 103 IFGIHLCKLWLTCDVLCCTA 122
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 23.4 bits (48), Expect = 2.1
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 210 IFSNGLCSAYLTCDEYFCNS 151
IF LC +LTCD C +
Sbjct: 103 IFGIHLCKLWLTCDVLCCTA 122
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 337 YGLNGVGTSKRNYNTVCCNIHYLE 408
Y N +K NYN + NI+Y+E
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYIE 117
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 337 YGLNGVGTSKRNYNTVCCNIHYLE 408
Y N +K NYN + NI+Y+E
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYIE 117
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 337 YGLNGVGTSKRNYNTVCCNIHYLE 408
Y N +K NYN + NI+Y+E
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYIE 117
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 337 YGLNGVGTSKRNYNTVCCNIHYLE 408
Y N +K NYN + NI+Y+E
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYIE 117
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 337 YGLNGVGTSKRNYNTVCCNIHYLE 408
Y N +K NYN + NI+Y+E
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYIE 117
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 337 YGLNGVGTSKRNYNTVCCNIHYLE 408
Y N +K NYN + NI+Y+E
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYIE 117
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 337 YGLNGVGTSKRNYNTVCCNIHYLE 408
Y N +K NYN + NI+Y+E
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYIE 117
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 337 YGLNGVGTSKRNYNTVCCNIHYLE 408
Y N +K NYN + NI+Y+E
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYIE 117
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 337 YGLNGVGTSKRNYNTVCCNIHYLE 408
Y N +K NYN + NI+Y+E
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYIE 117
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 2.1
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 248 FQSLCELIYQYFEYFPMVCVL 186
++S CE+ +YF + CVL
Sbjct: 149 YKSSCEIDVEYFPFDEQTCVL 169
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 337 YGLNGVGTSKRNYNTVCCNIHYLE 408
Y N +K NYN + NI+Y+E
Sbjct: 327 YNNNYNNYNKHNYNKLYYNINYIE 350
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 337 YGLNGVGTSKRNYNTVCCNIHYLE 408
Y N +K NYN + NI+Y+E
Sbjct: 327 YNNNYNNYNKHNYNKLYYNINYIE 350
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 23.4 bits (48), Expect = 2.1
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 210 IFSNGLCSAYLTCDEYFCNS 151
IF LC +LTCD C +
Sbjct: 103 IFGIHLCKLWLTCDVLCCTA 122
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 3.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 361 SKRNYNTVCCNIHYLE 408
+ NY +C NI+Y+E
Sbjct: 95 NNNNYKQLCYNINYIE 110
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 3.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 361 SKRNYNTVCCNIHYLE 408
+ NY +C NI+Y+E
Sbjct: 95 NNNNYKQLCYNINYIE 110
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 3.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 361 SKRNYNTVCCNIHYLE 408
+ NY +C NI+Y+E
Sbjct: 95 NNNNYKQLCYNINYIE 110
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 3.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 361 SKRNYNTVCCNIHYLE 408
+ NY +C NI+Y+E
Sbjct: 95 NNNNYKQLCYNINYIE 110
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 3.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 361 SKRNYNTVCCNIHYLE 408
+ NY +C NI+Y+E
Sbjct: 95 NNNNYKQLCYNINYIE 110
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.6 bits (46), Expect = 3.6
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -3
Query: 248 FQSLCELIYQYFEYFPMVCVL 186
++S CE+ +YF + CV+
Sbjct: 145 YKSSCEIDVEYFPFDEQTCVM 165
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -1
Query: 460 YCEIYMSWSINNVNVMFLPNSVCCSRLY 377
YC Y+ W+ V L +S SRL+
Sbjct: 473 YCPRYIKWTNRERGVFKLVDSKAVSRLW 500
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 215 NIGISAHIDSGKTTLTERI 271
NIG H+ GK+T+ + I
Sbjct: 44 NIGTIGHVAHGKSTIVKAI 62
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +3
Query: 114 RLKIQKNRVYFKLSYRNIHHMSNMQNTNH 200
R + ++ ++ LS + IH+ +N N N+
Sbjct: 73 RERSREPKIISSLSNKTIHNNNNYNNNNY 101
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +3
Query: 114 RLKIQKNRVYFKLSYRNIHHMSNMQNTNH 200
R + ++ ++ LS + IH+ +N N N+
Sbjct: 73 RERSREPKIISSLSNKTIHNNNNYNNNNY 101
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = -3
Query: 248 FQSLCELIYQYFEYFPMVCVLHI 180
++S C + ++F Y CVL +
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKL 171
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 8.4
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = -3
Query: 248 FQSLCELIYQYFEYFPMVCVL 186
++S CE+ +YF + C +
Sbjct: 141 YKSFCEIDVEYFPFDEQTCFM 161
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +3
Query: 114 RLKIQKNRVYFKLSYRNIHHMSNMQNTNH 200
R + ++ ++ LS + IH+ +N N N+
Sbjct: 306 RERSREPKIISSLSNKTIHNNNNYNNNNY 334
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.4 bits (43), Expect = 8.4
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = -3
Query: 248 FQSLCELIYQYFEYFPMVCVL 186
++S CE+ +YF + C++
Sbjct: 154 YKSSCEINVEYFPFDEQSCIM 174
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,804
Number of Sequences: 438
Number of extensions: 4586
Number of successful extensions: 44
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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