Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25m09
         (677 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC108676-1|AAI08677.1|  445|Homo sapiens hypothetical protein LO...   146   6e-35
AK131284-1|BAD18458.1|  445|Homo sapiens protein ( Homo sapiens ...   146   6e-35
U93162-1|AAB81566.1|  293|Homo sapiens C4-sterol methyl oxidase ...    33   1.2  
U60205-1|AAC50587.1|  293|Homo sapiens methyl sterol oxidase pro...    33   1.2  
BC107879-1|AAI07880.1|  293|Homo sapiens sterol-C4-methyl oxidas...    33   1.2  
BC010653-1|AAH10653.1|  293|Homo sapiens sterol-C4-methyl oxidas...    33   1.2  

>BC108676-1|AAI08677.1|  445|Homo sapiens hypothetical protein
           LOC392636 protein.
          Length = 445

 Score =  146 bits (354), Expect = 6e-35
 Identities = 65/138 (47%), Positives = 90/138 (65%), Gaps = 1/138 (0%)
 Frame = +2

Query: 266 KGVGRLFYINSPQDSMFEKKDDVPNFFKQSWPYFFIFMILEHIVLR-LEGKPGVRLNDGI 442
           +G   LFY   P ++ F+  ++VP++ K++ P+F   M+LE +V   L+GKP  RL+D +
Sbjct: 14  QGFRMLFYTMKPSETSFQTLEEVPDYVKKATPFFISLMLLELVVSWILKGKPPGRLDDAL 73

Query: 443 TSISHGIFQECGRIIWRGAESYLYTWIYTNYRLVELPWDSTLTWYAAALGVDFCYYWMHR 622
           TSIS G+      + +R  E   Y +I+ NYRL  LPWDS  TWY+A LGVDF YYW HR
Sbjct: 74  TSISAGVLSRLPSLFFRSIELTSYIYIWENYRLFNLPWDSPWTWYSAFLGVDFGYYWFHR 133

Query: 623 ACHEVHILWAQHQVHHTS 676
             HEV+I+WA HQ HH+S
Sbjct: 134 MAHEVNIMWAGHQTHHSS 151


>AK131284-1|BAD18458.1|  445|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16237 fis, clone HCASM2002754. ).
          Length = 445

 Score =  146 bits (354), Expect = 6e-35
 Identities = 65/138 (47%), Positives = 90/138 (65%), Gaps = 1/138 (0%)
 Frame = +2

Query: 266 KGVGRLFYINSPQDSMFEKKDDVPNFFKQSWPYFFIFMILEHIVLR-LEGKPGVRLNDGI 442
           +G   LFY   P ++ F+  ++VP++ K++ P+F   M+LE +V   L+GKP  RL+D +
Sbjct: 14  QGFRMLFYTMKPSETSFQTLEEVPDYVKKATPFFISLMLLELVVSWILKGKPPGRLDDAL 73

Query: 443 TSISHGIFQECGRIIWRGAESYLYTWIYTNYRLVELPWDSTLTWYAAALGVDFCYYWMHR 622
           TSIS G+      + +R  E   Y +I+ NYRL  LPWDS  TWY+A LGVDF YYW HR
Sbjct: 74  TSISAGVLSRLPSLFFRSIELTSYIYIWENYRLFNLPWDSPWTWYSAFLGVDFGYYWFHR 133

Query: 623 ACHEVHILWAQHQVHHTS 676
             HEV+I+WA HQ HH+S
Sbjct: 134 MAHEVNIMWAGHQTHHSS 151


>U93162-1|AAB81566.1|  293|Homo sapiens C4-sterol methyl oxidase
           homolog protein.
          Length = 293

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
 Frame = +2

Query: 515 TWIYTNYRLVELPWDSTLTWY-------AAALGVDFCYYWMHRACHEVHILWAQHQVHH 670
           T+ +T Y  +   W+    WY         A+  D  +Y++HR  H   I    H+VHH
Sbjct: 116 TYYFTEYFNIPYDWERMPRWYFLLARCFGCAVIEDTWHYFLHRLLHHKRIYKYIHKVHH 174


>U60205-1|AAC50587.1|  293|Homo sapiens methyl sterol oxidase
           protein.
          Length = 293

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
 Frame = +2

Query: 515 TWIYTNYRLVELPWDSTLTWY-------AAALGVDFCYYWMHRACHEVHILWAQHQVHH 670
           T+ +T Y  +   W+    WY         A+  D  +Y++HR  H   I    H+VHH
Sbjct: 116 TYYFTEYFNIPYDWERMPRWYFLLARCFGCAVIEDTWHYFLHRLLHHKRIYKYIHKVHH 174


>BC107879-1|AAI07880.1|  293|Homo sapiens sterol-C4-methyl
           oxidase-like protein.
          Length = 293

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
 Frame = +2

Query: 515 TWIYTNYRLVELPWDSTLTWY-------AAALGVDFCYYWMHRACHEVHILWAQHQVHH 670
           T+ +T Y  +   W+    WY         A+  D  +Y++HR  H   I    H+VHH
Sbjct: 116 TYYFTEYFNIPYDWERMPRWYFLLARCFGCAVIEDTWHYFLHRLLHHKRIYKYIHKVHH 174


>BC010653-1|AAH10653.1|  293|Homo sapiens sterol-C4-methyl
           oxidase-like protein.
          Length = 293

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
 Frame = +2

Query: 515 TWIYTNYRLVELPWDSTLTWY-------AAALGVDFCYYWMHRACHEVHILWAQHQVHH 670
           T+ +T Y  +   W+    WY         A+  D  +Y++HR  H   I    H+VHH
Sbjct: 116 TYYFTEYFNIPYDWERMPRWYFLLARCFGCAVIEDTWHYFLHRLLHHKRIYKYIHKVHH 174


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,836,139
Number of Sequences: 237096
Number of extensions: 2084807
Number of successful extensions: 4992
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4990
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)