Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25l16
         (674 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC009557-1|AAH09557.1|  118|Homo sapiens hypothetical protein P1...    36   0.17 
AB167391-1|BAE80091.1|  118|Homo sapiens hypothetical protein P1...    36   0.17 
BC042386-1|AAH42386.1|  118|Homo sapiens hypothetical protein P1...    35   0.30 
BC047440-1|AAH47440.1|  200|Homo sapiens COMM domain containing ...    33   0.93 
AY542162-1|AAS22244.1|  200|Homo sapiens COMMD7 protein.               33   0.93 
CR383702-1|CAI95302.2|  200|Homo sapiens COMM domain containing ...    31   2.8  
BX640505-1|CAM28357.1|  200|Homo sapiens COMM domain containing ...    31   2.8  
BC000628-1|AAH00628.3|  200|Homo sapiens COMM domain containing ...    31   2.8  
AL035071-1|CAI19095.2|  200|Homo sapiens COMM domain containing ...    31   2.8  
AK027893-1|BAB55436.1|  200|Homo sapiens protein ( Homo sapiens ...    31   2.8  

>BC009557-1|AAH09557.1|  118|Homo sapiens hypothetical protein P117
           protein.
          Length = 118

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 20/110 (18%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
 Frame = +2

Query: 104 FTMLKFGVKSVLLGSAVYYTIDKGVWKDSATTAAIYDELEKGMSPYVGELKS----QVPY 271
           +++++F +K  + G AVY   D+ +   S  + A   +  + + P + +       Q   
Sbjct: 6   WSLMRFLIKGSVAGGAVYLVYDQELLGPSDKSQAALQKAGEVVPPAMYQFSQYVCQQTGL 65

Query: 272 ELPALPSNDRISYLFKYYWNCGVKATFRFLVELPTHTSNAAFKTYDFISS 421
           ++P LP+  +I +  +  WN G+      L   P+     + + ++++ +
Sbjct: 66  QIPQLPAPPKIYFPIRDSWNAGIMTVMSALSVAPSKAREYSKEGWEYVKA 115


>AB167391-1|BAE80091.1|  118|Homo sapiens hypothetical protein P117
           protein.
          Length = 118

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 20/110 (18%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
 Frame = +2

Query: 104 FTMLKFGVKSVLLGSAVYYTIDKGVWKDSATTAAIYDELEKGMSPYVGELKS----QVPY 271
           +++++F +K  + G AVY   D+ +   S  + A   +  + + P + +       Q   
Sbjct: 6   WSLMRFLIKGSVAGGAVYLVYDQELLGPSDKSQAALQKAGEVVPPAMYQFSQYVCQQTGL 65

Query: 272 ELPALPSNDRISYLFKYYWNCGVKATFRFLVELPTHTSNAAFKTYDFISS 421
           ++P LP+  +I +  +  WN G+      L   P+     + + ++++ +
Sbjct: 66  QIPQLPAPPKIYFPIRDSWNAGIMTVMSALSVAPSKAREYSKEGWEYVKA 115


>BC042386-1|AAH42386.1|  118|Homo sapiens hypothetical protein P117
           protein.
          Length = 118

 Score = 34.7 bits (76), Expect = 0.30
 Identities = 20/110 (18%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
 Frame = +2

Query: 104 FTMLKFGVKSVLLGSAVYYTIDKGVWKDSATTAAIYDELEKGMSPYVGELKS----QVPY 271
           +++++F +K  + G AVY   D+ +   S  + A   +  + + P + +       Q   
Sbjct: 6   WSLMRFLIKGSVAGVAVYLVYDQELLGPSDKSQAALQKAGEVVPPAMYQFSQYVCQQTGL 65

Query: 272 ELPALPSNDRISYLFKYYWNCGVKATFRFLVELPTHTSNAAFKTYDFISS 421
           ++P LP+  +I +  +  WN G+      L   P+     + + ++++ +
Sbjct: 66  QIPQLPAPPKIYFPIRDSWNAGIMTVMSALSVAPSKAREYSKEGWEYVKA 115


>BC047440-1|AAH47440.1|  200|Homo sapiens COMM domain containing 7
           protein.
          Length = 200

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
 Frame = -3

Query: 438 SGVSKDDEIKSYVLKAALLVWVGNSTKNLNVALT-PQFQ*YLNKYD 304
           SG S+ +++ S  L+  L+V  GN TKN+ + LT PQF  +L++ +
Sbjct: 145 SGSSELEKVGSIFLQLKLVVKKGNQTKNVYIELTLPQFYSFLHEME 190


>AY542162-1|AAS22244.1|  200|Homo sapiens COMMD7 protein.
          Length = 200

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
 Frame = -3

Query: 438 SGVSKDDEIKSYVLKAALLVWVGNSTKNLNVALT-PQFQ*YLNKYD 304
           SG S+ +++ S  L+  L+V  GN TKN+ + LT PQF  +L++ +
Sbjct: 145 SGSSELEKVGSIFLQLKLVVKKGNQTKNVYIELTLPQFYSFLHEME 190


>CR383702-1|CAI95302.2|  200|Homo sapiens COMM domain containing 7
           protein.
          Length = 200

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
 Frame = -3

Query: 438 SGVSKDDEIKSYVLKAALLVWVGNSTKNLNVALT-PQFQ*YLNKYD 304
           SG S+ +++ S  L+  L+V  GN T+N+ + LT PQF  +L++ +
Sbjct: 145 SGSSELEKVGSIFLQLKLVVKKGNQTENVYIELTLPQFYSFLHEME 190


>BX640505-1|CAM28357.1|  200|Homo sapiens COMM domain containing 7
           protein.
          Length = 200

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
 Frame = -3

Query: 438 SGVSKDDEIKSYVLKAALLVWVGNSTKNLNVALT-PQFQ*YLNKYD 304
           SG S+ +++ S  L+  L+V  GN T+N+ + LT PQF  +L++ +
Sbjct: 145 SGSSELEKVGSIFLQLKLVVKKGNQTENVYIELTLPQFYSFLHEME 190


>BC000628-1|AAH00628.3|  200|Homo sapiens COMM domain containing 7
           protein.
          Length = 200

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
 Frame = -3

Query: 438 SGVSKDDEIKSYVLKAALLVWVGNSTKNLNVALT-PQFQ*YLNKYD 304
           SG S+ +++ S  L+  L+V  GN T+N+ + LT PQF  +L++ +
Sbjct: 145 SGSSELEKVGSIFLQLKLVVKKGNQTENVYIELTLPQFYSFLHEME 190


>AL035071-1|CAI19095.2|  200|Homo sapiens COMM domain containing 7
           protein.
          Length = 200

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
 Frame = -3

Query: 438 SGVSKDDEIKSYVLKAALLVWVGNSTKNLNVALT-PQFQ*YLNKYD 304
           SG S+ +++ S  L+  L+V  GN T+N+ + LT PQF  +L++ +
Sbjct: 145 SGSSELEKVGSIFLQLKLVVKKGNQTENVYIELTLPQFYSFLHEME 190


>AK027893-1|BAB55436.1|  200|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14987 fis, clone Y79AA1001077. ).
          Length = 200

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
 Frame = -3

Query: 438 SGVSKDDEIKSYVLKAALLVWVGNSTKNLNVALT-PQFQ*YLNKYD 304
           SG S+ +++ S  L+  L+V  GN T+N+ + LT PQF  +L++ +
Sbjct: 145 SGSSELEKVGSIFLQLKLVVKKGNQTENVYIELTLPQFYSFLHEME 190


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,506,483
Number of Sequences: 237096
Number of extensions: 1812161
Number of successful extensions: 3731
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3731
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)