Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25l02
         (647 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0457 + 25359486-25359571,25360690-25360782,25361561-253616...    59   3e-09
05_07_0194 + 28327328-28327376,28327699-28327742,28327852-283279...    58   8e-09
01_06_0109 - 26526691-26526775,26526894-26527019,26527228-265273...    57   1e-08
01_01_1031 + 8169505-8169553,8169831-8169905,8170395-8170438,817...    51   7e-07
04_04_0158 - 23187070-23187264,23187347-23187477,23187550-231877...    28   7.4  
12_01_1079 - 11223247-11223336,11223606-11223717,11224743-112248...    27   9.7  

>04_04_0457 +
           25359486-25359571,25360690-25360782,25361561-25361622,
           25361758-25361816,25363624-25363733,25364795-25364829,
           25365469-25365546,25365952-25366005,25366277-25366362,
           25366468-25366571,25366986-25367054,25367135-25367250,
           25367387-25367421,25367512-25367654,25367808-25367930,
           25368463-25368556
          Length = 448

 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 25/48 (52%), Positives = 38/48 (79%)
 Frame = +3

Query: 78  ACVECIDSGKMTKDLVICIHGLANTKEGMFLHTEDFLEAIAEQLERKL 221
           AC+E ++SGKMTKDL + IHG   T+E  +L+TE+F++A+A+QL  K+
Sbjct: 396 ACIETVESGKMTKDLALLIHGPKVTRE-FYLNTEEFIDAVAQQLREKI 442


>05_07_0194 +
           28327328-28327376,28327699-28327742,28327852-28327961,
           28328250-28328287,28328371-28328448,28328527-28328580,
           28328663-28328764,28329152-28329237,28329327-28329430,
           28329542-28329610,28329689-28329804,28329949-28329983,
           28330152-28330294,28330473-28330598,28330700-28330784
          Length = 412

 Score = 57.6 bits (133), Expect = 8e-09
 Identities = 21/48 (43%), Positives = 36/48 (75%)
 Frame = +3

Query: 78  ACVECIDSGKMTKDLVICIHGLANTKEGMFLHTEDFLEAIAEQLERKL 221
           AC+  ++SGKMTKDL + +HG +N     +L+TE+F++A+A++L  +L
Sbjct: 362 ACIGAVESGKMTKDLALLVHGSSNVTRSHYLNTEEFIDAVADELRSRL 409


>01_06_0109 -
           26526691-26526775,26526894-26527019,26527228-26527370,
           26527521-26527555,26527676-26527791,26527868-26527936,
           26528070-26528173,26528253-26528338,26528429-26528530,
           26528609-26528662,26528763-26528840,26528936-26528973,
           26529235-26529344,26529463-26529506,26530232-26530280
          Length = 412

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 23/48 (47%), Positives = 35/48 (72%)
 Frame = +3

Query: 78  ACVECIDSGKMTKDLVICIHGLANTKEGMFLHTEDFLEAIAEQLERKL 221
           ACV  ++SGKMTKDL + IHG +N     +L+TE+F++A+A +L  +L
Sbjct: 362 ACVGTVESGKMTKDLALLIHGSSNVTRSHYLNTEEFIDAVAAELRSRL 409


>01_01_1031 +
           8169505-8169553,8169831-8169905,8170395-8170438,
           8170633-8170742,8170960-8170997,8171055-8171186,
           8171298-8171351,8171424-8171525,8172679-8172764,
           8172870-8172973,8173056-8173124,8173156-8173209,
           8173210-8173325,8173420-8173454,8173637-8173779,
           8174105-8174227,8174305-8174398
          Length = 475

 Score = 51.2 bits (117), Expect = 7e-07
 Identities = 22/48 (45%), Positives = 33/48 (68%)
 Frame = +3

Query: 78  ACVECIDSGKMTKDLVICIHGLANTKEGMFLHTEDFLEAIAEQLERKL 221
           ACV  ++SGKMTKDL + +HG  N     +L+T +F++A+AE L  +L
Sbjct: 423 ACVGTVESGKMTKDLALLVHG-PNVSRDKYLNTVEFIDAVAEDLRTRL 469


>04_04_0158 -
           23187070-23187264,23187347-23187477,23187550-23187763,
           23187834-23187932,23188034-23188156,23188247-23188366,
           23188447-23188506,23188592-23188884,23189554-23189707,
           23189813-23190130,23190668-23190798,23191001-23191586,
           23192125-23192739
          Length = 1012

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -1

Query: 593 CLSESGSTSELTHRHSPLSFSPDLLSGSRFRSGGRF 486
           CL+ES STS  +   SPLS S    S S   SG +F
Sbjct: 820 CLTESTSTSSESTHQSPLSSSVMHNSDSHRVSGSKF 855


>12_01_1079 -
           11223247-11223336,11223606-11223717,11224743-11224825,
           11226061-11226173,11226261-11226337,11228626-11228719,
           11229072-11229160,11230485-11230560,11231637-11231808
          Length = 301

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = -1

Query: 134 YTNNQI-FCHFTAIDALDARLCPK 66
           Y NNQI +CH T++ +   RLCP+
Sbjct: 268 YYNNQIRYCHDTSVRSPMNRLCPQ 291


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,012,200
Number of Sequences: 37544
Number of extensions: 307842
Number of successful extensions: 712
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)