Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25k12
(664 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 51 2e-07
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 37 0.002
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S... 33 0.037
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 32 0.064
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 31 0.20
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 31 0.20
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 30 0.34
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 28 1.0
SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces po... 25 9.7
SPBC1105.15c |htd2||3-hydroxyacyl-ACP dehydratase Htd2 |Schizosa... 25 9.7
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 50.8 bits (116), Expect = 2e-07
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Frame = +2
Query: 314 SLHAKAGRGEI-TRDDLKLEQYVDI--TDEHGLTALHWAASYGQLNSCQDLVWCGANVN- 481
SL A +GE+ T +L + +D+ TDE G TALHWAA Q+ C+ L+ GA+VN
Sbjct: 3 SLFLAASQGELDTVKNLISSEKIDVNATDEGGATALHWAALNQQIPICKFLLEHGADVNA 62
Query: 482 MRGPXXXXXXXXXXXXXXXXVVKFLLNEGADADIQDDSGSTALMYAAAADFP 637
+ G V +L+ GAD ++D G L A A P
Sbjct: 63 IGGDLQAAPIHWAAKRGSVKTVHYLVQHGADPLLKDKQGFNCLHLAVHAASP 114
Score = 25.4 bits (53), Expect = 7.4
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 332 GRGEITRDDLKLEQYVDITDEHGLTALHWAASYGQLNSCQDLV 460
G IT L+ V TDE +T LHW+ G L C L+
Sbjct: 145 GNEPITNCLLRWGADVLATDEDKMTPLHWSIVGGNL-KCMKLI 186
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 37.1 bits (82), Expect = 0.002
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +2
Query: 389 DEHGLTALHWAASYGQLNSCQDLVWCGANV 478
DE G TALHWAA+ G L L+ GANV
Sbjct: 234 DEDGHTALHWAAAMGNLEMMHALLQAGANV 263
>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 33.1 bits (72), Expect = 0.037
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +2
Query: 305 PDYSLHAKAGRGEITRDDLKLEQYVDITDEHGLTALHWAASYGQLNSCQDLVWCGANVNM 484
P+ + A G+ ++ L + DE+G T +H A SYG + + LV G ++N+
Sbjct: 6 PNIWIAASDGKTDVVLKHLDSGISPNAADENGYTPIHAAVSYGHSDLLKILVERGGDINI 65
Query: 485 R 487
R
Sbjct: 66 R 66
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 32.3 bits (70), Expect = 0.064
Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 2/138 (1%)
Frame = +2
Query: 248 ALTNLQRGNTQARVPELPQPDYSLHAKAGRGEITRDDLKLEQY-VDITDEHGLTALHWAA 424
AL + Q T + P P P L G ++ ++L L + + D TALH A
Sbjct: 317 ALLSAQDKETTSTKPG-PVPPLVLTCCVGDYDLIVEELILAGFNPNEVDASSNTALHTAV 375
Query: 425 SYGQLNSCQDLVWCGANVNMRG-PXXXXXXXXXXXXXXXXVVKFLLNEGADADIQDDSGS 601
Y + + L+ GAN + R +V L+ GA D D SG
Sbjct: 376 RYNRPECVKMLLKLGANPSARDFLNSWTPLMLASATGLSEIVSILVASGASVDEVDSSGW 435
Query: 602 TALMYAAAADFPYTCNEL 655
TA+ A + + ++L
Sbjct: 436 TAMEQAVVRGYLHLADKL 453
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 30.7 bits (66), Expect = 0.20
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +2
Query: 368 EQYVDITDEHGLTALHWAASYGQLNSCQDLVWCGANVNMR 487
++ ++ +E G TA+HWAA G C+ L+ G + +++
Sbjct: 61 KEVINAQNESGNTAMHWAALNGHAEICKLLLEAGGDPHIK 100
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 30.7 bits (66), Expect = 0.20
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 356 DLKLEQYVDIT---DEHGLTALHWAASYGQLNSCQDLVWCGAN 475
+ KL +D+ DE G ALHWAA+ ++ Q L+ GAN
Sbjct: 340 EAKLSDSLDLDVPIDELGHAALHWAAAVAKMPLLQALIHKGAN 382
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 29.9 bits (64), Expect = 0.34
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 308 DYSLHAKAGR-GEITRDDLKLEQYVDITDEHGLTALHWAASYGQLNSCQDLVWCGANVNM 484
D+ LH + GR Q + D+ G T+LHWA S G + + L+ A++ +
Sbjct: 217 DFFLHPEEGRIPSFLYSPPPDFQVNSVIDDDGHTSLHWACSMGHIEMIKLLLRANADIGV 276
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 28.3 bits (60), Expect = 1.0
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 551 FLLNEGADADIQDDSGSTALMYAAAADFPYTCNELL 658
FL N G D + +D G T L YA+ D C LL
Sbjct: 880 FLCNAGCDVNKRDALGYTPLHYASLYDHKDICVNLL 915
>SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 942
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = -2
Query: 396 CSSVMSTYCSSFKSSRVISPRPAFACRL*SG 304
C + + YC + K S S R F C + G
Sbjct: 729 CLNAVMEYCDTIKQSASASRRRVFVCEVQGG 759
>SPBC1105.15c |htd2||3-hydroxyacyl-ACP dehydratase Htd2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 300
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 575 HQPLHLTETSQPHGALQ 525
H+PLHL +TS+ H +Q
Sbjct: 91 HRPLHLFQTSECHELIQ 107
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,635,146
Number of Sequences: 5004
Number of extensions: 51400
Number of successful extensions: 137
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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