Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25i21
(419 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor prot... 24 0.80
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 1.1
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 22 2.4
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 21 7.5
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 7.5
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 21 7.5
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 21 7.5
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 21 7.5
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 20 9.9
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 20 9.9
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 20 9.9
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 20 9.9
>S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor
protein.
Length = 85
Score = 23.8 bits (49), Expect = 0.80
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 411 WAEVDGMCYSYDAHILVVILLREFGMV-NSKVNIRYFTG 298
W + G C S HI++V L EFG++ + K++ ++ G
Sbjct: 46 WFKAIGTCGS---HIIIVGLFYEFGLITHVKLSSDWYMG 81
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 1.1
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 106 VSIGEHPSLVQIEVFLPILNQWFQQCAGIVLTNYHYLSTATCFHGEFYDPAYRR 267
+S+G +P + + FL L+ W A V+ S C++G PAYRR
Sbjct: 919 LSLGSNPWSCRCK-FLQELSSWVSDNAHKVVD----ASDVWCYYGGDARPAYRR 967
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -2
Query: 220 LKGSGSW*EQYQRTVGTIDSR 158
+K SG W +Y R + D R
Sbjct: 288 VKNSGQWLREYDRELEDFDGR 308
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 20.6 bits (41), Expect = 7.5
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = +3
Query: 258 IPSHYRWIF 284
IP+HY W++
Sbjct: 107 IPNHYLWLY 115
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 20.6 bits (41), Expect = 7.5
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = +3
Query: 258 IPSHYRWIF 284
IP+HY W++
Sbjct: 138 IPNHYLWLY 146
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 20.6 bits (41), Expect = 7.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -3
Query: 315 IRYFTGLTATGRSSDNATVC 256
+RYF G A+G ++ ++C
Sbjct: 112 LRYFVGNLASGGAAGATSLC 131
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 20.6 bits (41), Expect = 7.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -3
Query: 315 IRYFTGLTATGRSSDNATVC 256
+RYF G A+G ++ ++C
Sbjct: 112 LRYFVGNLASGGAAGATSLC 131
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 20.6 bits (41), Expect = 7.5
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = +3
Query: 156 HLESMVPTVRWYCSHQLPLPF 218
H +PT+ W+ + Q P F
Sbjct: 326 HALITLPTIFWFLTRQNPAAF 346
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 20.2 bits (40), Expect = 9.9
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = +1
Query: 322 FAVNHPEFSEE 354
+A+NHP + +E
Sbjct: 336 YAINHPRYRQE 346
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 20.2 bits (40), Expect = 9.9
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -2
Query: 397 WHVLLVRCSHPCRNSP 350
W + V CS P R +P
Sbjct: 385 WQMSCVACSPPPRQTP 400
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 20.2 bits (40), Expect = 9.9
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +1
Query: 328 VNHPEFSEENY 360
+N EF++ENY
Sbjct: 55 INESEFNDENY 65
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 20.2 bits (40), Expect = 9.9
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = +1
Query: 322 FAVNHPEFSEE 354
+A+NHP + +E
Sbjct: 336 YAINHPRYRQE 346
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,996
Number of Sequences: 438
Number of extensions: 2694
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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