Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25i17
         (298 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   1.1  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   1.8  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               21   4.2  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    20   5.6  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    20   5.6  
AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor pr...    20   7.4  
AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor pr...    20   7.4  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    19   9.8  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    19   9.8  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    19   9.8  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    19   9.8  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    19   9.8  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    19   9.8  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    19   9.8  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    19   9.8  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    19   9.8  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    19   9.8  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    19   9.8  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    19   9.8  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    19   9.8  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    19   9.8  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    19   9.8  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    19   9.8  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    19   9.8  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    19   9.8  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    19   9.8  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    19   9.8  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +1

Query: 73  SQNVATRHNIVTVQLISVCFCIDITKVV*SMDQI*TKFC 189
           + N+A   N+V V+ + +   I    ++ SM Q+  + C
Sbjct: 4   TNNIAAFQNVVLVKKVKIVLLIFYGSIMFSMTQVNKEEC 42


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 180 RSNLIHRLNYFRNINTKTNRDQL 112
           +  LIHRL YF+N   + + + L
Sbjct: 335 QEELIHRLVYFQNEYEQPSEEDL 357


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = +3

Query: 120 LCLFLY*YYESSLIYGSNLNEVLLILSLN 206
           L +F+Y    + +I  + +NE+L I++++
Sbjct: 5   LVIFVYILSVAVIIRANGINEILKIMAVS 33


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 118 SAEL*QCYDVWQHFV 74
           SA    CY +W +FV
Sbjct: 213 SASYLVCYGIWVYFV 227


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 118 SAEL*QCYDVWQHFV 74
           SA    CY +W +FV
Sbjct: 89  SASYLVCYGIWVYFV 103


>AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +3

Query: 150 SSLIYGSNLNEVLLILSL 203
           SS++ G+N++ VLL  +L
Sbjct: 47  SSIVSGANVSAVLLAQTL 64


>AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +3

Query: 150 SSLIYGSNLNEVLLILSL 203
           SS++ G+N++ VLL  +L
Sbjct: 47  SSIVSGANVSAVLLAQTL 64


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 261 SRSRQNFQKSSKAHN 217
           SRSR+  QKS K  N
Sbjct: 40  SRSREREQKSYKNEN 54


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 261 SRSRQNFQKSSKAHN 217
           SRSR+  QKS K  N
Sbjct: 40  SRSREREQKSYKNEN 54


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 261 SRSRQNFQKSSKAHN 217
           SRSR+  QKS K  N
Sbjct: 40  SRSREREQKSYKNEN 54


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 261 SRSRQNFQKSSKAHN 217
           SRSR+  QKS K  N
Sbjct: 40  SRSREREQKSYKNEN 54


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 261 SRSRQNFQKSSKAHN 217
           SRSR+  QKS K  N
Sbjct: 40  SRSREREQKSYKNEN 54


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 261 SRSRQNFQKSSKAHN 217
           SRSR+  QKS K  N
Sbjct: 40  SRSREREQKSYKNEN 54


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 261 SRSRQNFQKSSKAHN 217
           SRSR+  QKS K  N
Sbjct: 40  SRSREREQKSYKNEN 54


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 261 SRSRQNFQKSSKAHN 217
           SRSR+  QKS K  N
Sbjct: 40  SRSREREQKSYKNEN 54


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 261 SRSRQNFQKSSKAHN 217
           SRSR+  QKS K  N
Sbjct: 40  SRSREREQKSYKNEN 54


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 261 SRSRQNFQKSSKAHN 217
           SRSR+  QKS K  N
Sbjct: 40  SRSREREQKSYKNEN 54


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 261 SRSRQNFQKSSKAHN 217
           SRSR+  QKS K  N
Sbjct: 40  SRSREREQKSYKNEN 54


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 261 SRSRQNFQKSSKAHN 217
           SRSR+  QKS K  N
Sbjct: 40  SRSREREQKSYKNEN 54


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 261 SRSRQNFQKSSKAHN 217
           SRSR+  QKS K  N
Sbjct: 273 SRSREREQKSYKNEN 287


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 261 SRSRQNFQKSSKAHN 217
           SRSR+  QKS K  N
Sbjct: 262 SRSREREQKSYKNEN 276


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 261 SRSRQNFQKSSKAHN 217
           SRSR+  QKS K  N
Sbjct: 273 SRSREREQKSYKNEN 287


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 261 SRSRQNFQKSSKAHN 217
           SRSR+  QKS K  N
Sbjct: 273 SRSREREQKSYKNEN 287


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 261 SRSRQNFQKSSKAHN 217
           SRSR+  QKS K  N
Sbjct: 262 SRSREREQKSYKNEN 276


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 261 SRSRQNFQKSSKAHN 217
           SRSR+  QKS K  N
Sbjct: 273 SRSREREQKSYKNEN 287


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 261 SRSRQNFQKSSKAHN 217
           SRSR+  QKS K  N
Sbjct: 278 SRSREREQKSYKNEN 292


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 261 SRSRQNFQKSSKAHN 217
           SRSR+  QKS K  N
Sbjct: 273 SRSREREQKSYKNEN 287


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,108
Number of Sequences: 438
Number of extensions: 992
Number of successful extensions: 27
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6119169
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)