Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25h19
(680 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 24 1.5
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 24 1.5
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 2.0
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 2.7
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 2.7
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 2.7
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 2.7
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 2.7
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 23 3.6
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 6.2
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 8.2
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 8.2
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.8 bits (49), Expect = 1.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 551 TRNTLYFNTIYSNYXNHQKYYS 616
+ T++ N Y+NY N + YY+
Sbjct: 308 SNKTIHNNNNYNNYNNKKLYYN 329
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 539 SYNSTRNTLYFNTIYSNYXNHQKYYSTWNFSST 637
+Y+S NTL + + SN + K+ + N SST
Sbjct: 300 AYSSLENTLKYYEVGSNVPFNFKFITDANSSST 332
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.4 bits (48), Expect = 2.0
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +2
Query: 521 YKSHIYSYNSTRNTLYFNTIYSNYXNHQK--YYSTWN 625
+ ++ Y YN N N +NY N+ K YY+ N
Sbjct: 324 HNNNNYKYNYNNNNYNNNNYNNNYNNNCKKLYYNIIN 360
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 2.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 512 N*KYKSHIYSYNSTRNTLYFNTIYSNYXNHQKYY 613
N KY S+ +YN+ N Y N +NY K Y
Sbjct: 88 NYKY-SNYNNYNNNYNNNYNNNYNNNYKKLYKNY 120
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 2.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 512 N*KYKSHIYSYNSTRNTLYFNTIYSNYXNHQKYY 613
N KY S+ +YN+ N Y N +NY K Y
Sbjct: 88 NYKY-SNYNNYNNNYNNNYNNNYNNNYKKLYKNY 120
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.7
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +2
Query: 533 IYSYNSTRNTLYFNTIYSNY-XNHQKYYSTWNFSSTIN 643
I + NS N +N Y+NY N+ Y + + IN
Sbjct: 82 ISNNNSLSNNYNYNNNYNNYNNNYNTNYKKLQYYNIIN 119
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 557 NTLYFNTIYSNYXNHQKYYSTWN 625
++L N YSNY N+ Y+ +N
Sbjct: 83 SSLSNNYNYSNYNNYNNNYNNYN 105
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 557 NTLYFNTIYSNYXNHQKYYSTWN 625
++L N YSNY N+ Y+ +N
Sbjct: 316 SSLSNNYKYSNYNNYNNNYNNYN 338
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 22.6 bits (46), Expect = 3.6
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = -2
Query: 337 NVLNSLCNFFEMKFHIIKCRFGINQNLYGINNNPKIVLIQFIGKF 203
NV +C+ + ++F + ++GI QN +I ++ G F
Sbjct: 48 NVPTFMCHKYGLRFEEVSEKYGILQNWMDKFRGEEIAILYDPGMF 92
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 557 NTLYFNTIYSNYXNHQKYYST 619
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 557 NTLYFNTIYSNYXNHQKYYST 619
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 557 NTLYFNTIYSNYXNHQKYYST 619
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 557 NTLYFNTIYSNYXNHQKYYST 619
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 557 NTLYFNTIYSNYXNHQKYYST 619
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 557 NTLYFNTIYSNYXNHQKYYST 619
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 557 NTLYFNTIYSNYXNHQKYYST 619
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 539 SYNSTRNTLYFNTIYSNY 592
S+ T N YF+ Y NY
Sbjct: 209 SWRITHNFFYFDPRYGNY 226
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 8.2
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 557 NTLYFNTIYSNYXNHQKYYSTWN 625
++L NTI++N N + YY+ N
Sbjct: 316 SSLSNNTIHNNNYNKKLYYNIIN 338
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,040
Number of Sequences: 438
Number of extensions: 2374
Number of successful extensions: 26
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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