Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25h06
(631 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC073997-1|AAH73997.1| 195|Homo sapiens peroxisomal membrane pr... 76 9e-14
AY044439-1|AAK95858.1| 195|Homo sapiens 22 kDa peroxisomal memb... 76 9e-14
AF250136-1|AAF73963.1| 195|Homo sapiens 22kDa peroxisomal membr... 76 9e-14
BC093008-1|AAH93008.1| 206|Homo sapiens hypothetical protein MG... 64 3e-10
BC005064-1|AAH05064.1| 181|Homo sapiens FKSG24 protein protein. 40 0.006
AF416712-1|AAL16806.1| 181|Homo sapiens unknown protein. 40 0.006
>BC073997-1|AAH73997.1| 195|Homo sapiens peroxisomal membrane
protein 2, 22kDa protein.
Length = 195
Score = 76.2 bits (179), Expect = 9e-14
Identities = 54/168 (32%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Frame = +2
Query: 149 VASYLQNLYLHPIKTKAITSCVVGTAGSLASQIVAGE-----SIRLDPIXXXXXXXXXXX 313
+A YL L L+P+ TKA TS ++ G+ +Q++ + S LD
Sbjct: 22 LAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFF 81
Query: 314 XTVP--HYFYETVERLFPEESASFPLA--KKLLLERLIFAPLMQAFSLYSLARFEGKTHR 481
T P H+FY +E P E PLA ++LLL+RL+FAP + EGK
Sbjct: 82 FTGPLSHFFYFFMEHWIPPE---VPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDAS 138
Query: 482 AALKQLFALYLPVLEANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGW 625
A ++ + P L NW+ T Q IN+ ++P RVLF N+ W
Sbjct: 139 AFAAKMRGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFW 186
>AY044439-1|AAK95858.1| 195|Homo sapiens 22 kDa peroxisomal
membrane protein 2 protein.
Length = 195
Score = 76.2 bits (179), Expect = 9e-14
Identities = 54/168 (32%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Frame = +2
Query: 149 VASYLQNLYLHPIKTKAITSCVVGTAGSLASQIVAGE-----SIRLDPIXXXXXXXXXXX 313
+A YL L L+P+ TKA TS ++ G+ +Q++ + S LD
Sbjct: 22 LAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFF 81
Query: 314 XTVP--HYFYETVERLFPEESASFPLA--KKLLLERLIFAPLMQAFSLYSLARFEGKTHR 481
T P H+FY +E P E PLA ++LLL+RL+FAP + EGK
Sbjct: 82 FTGPLSHFFYFFMEHWIPPE---VPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDAS 138
Query: 482 AALKQLFALYLPVLEANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGW 625
A ++ + P L NW+ T Q IN+ ++P RVLF N+ W
Sbjct: 139 AFAAKMRGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFW 186
>AF250136-1|AAF73963.1| 195|Homo sapiens 22kDa peroxisomal membrane
protein-like protein.
Length = 195
Score = 76.2 bits (179), Expect = 9e-14
Identities = 54/168 (32%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Frame = +2
Query: 149 VASYLQNLYLHPIKTKAITSCVVGTAGSLASQIVAGE-----SIRLDPIXXXXXXXXXXX 313
+A YL L L+P+ TKA TS ++ G+ +Q++ + S LD
Sbjct: 22 LAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFF 81
Query: 314 XTVP--HYFYETVERLFPEESASFPLA--KKLLLERLIFAPLMQAFSLYSLARFEGKTHR 481
T P H+FY +E P E PLA ++LLL+RL+FAP + EGK
Sbjct: 82 FTGPLSHFFYFFMEHWIPPE---VPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDAS 138
Query: 482 AALKQLFALYLPVLEANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGW 625
A ++ + P L NW+ T Q IN+ ++P RVLF N+ W
Sbjct: 139 AFAAKMRGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFW 186
>BC093008-1|AAH93008.1| 206|Homo sapiens hypothetical protein
MGC12972 protein.
Length = 206
Score = 64.5 bits (150), Expect = 3e-10
Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Frame = +2
Query: 326 HYFYETVERLFPEESA-SFP-LAKKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQL 499
HY+Y +++RLFP FP + KK+L+++L+ +PL+ + L EG+T + ++L
Sbjct: 77 HYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWYFLGLGCLEGQTVGESCQEL 136
Query: 500 FALYLPVLEANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGW 625
+ +A+W Q +N F+PP RV ++N + GW
Sbjct: 137 REKFWEFYKADWCVWPAAQFVNFLFVPPQFRVTYINGLTLGW 178
>BC005064-1|AAH05064.1| 181|Homo sapiens FKSG24 protein protein.
Length = 181
Score = 40.3 bits (90), Expect = 0.006
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +2
Query: 326 HYFYETVERLFPEES-ASFP-LAKKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQL 499
HY+Y +++RLFP FP + KK+L+++L+ +PL+ + Y
Sbjct: 77 HYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWEFY----------------- 119
Query: 500 FALYLPVLEANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGW 625
+A+W Q +N F+PP RV ++N + GW
Sbjct: 120 --------KADWCVWPAAQFVNFLFVPPQFRVTYINGLTLGW 153
>AF416712-1|AAL16806.1| 181|Homo sapiens unknown protein.
Length = 181
Score = 40.3 bits (90), Expect = 0.006
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +2
Query: 326 HYFYETVERLFPEES-ASFP-LAKKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQL 499
HY+Y +++RLFP FP + KK+L+++L+ +PL+ + Y
Sbjct: 77 HYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWEFY----------------- 119
Query: 500 FALYLPVLEANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGW 625
+A+W Q +N F+PP RV ++N + GW
Sbjct: 120 --------KADWCVWPAAQFVNFLFVPPQFRVTYINGLTLGW 153
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,899,185
Number of Sequences: 237096
Number of extensions: 1662553
Number of successful extensions: 2952
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2948
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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