Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25f22
(611 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00638-1|CAA68669.1| 1304|Homo sapiens protein ( Human mRNA for ... 32 1.8
Y00062-1|CAA68269.1| 1143|Homo sapiens protein ( Human mRNA for ... 32 1.8
M23492-1|AAD15273.2| 1114|Homo sapiens T200 leukocyte common ant... 32 1.8
AL355988-3|CAI19378.1| 1306|Homo sapiens protein tyrosine phosph... 32 1.8
AL355988-2|CAI19379.1| 1145|Homo sapiens protein tyrosine phosph... 32 1.8
AL157402-4|CAI15641.1| 1306|Homo sapiens protein tyrosine phosph... 32 1.8
AL157402-3|CAI15640.1| 1145|Homo sapiens protein tyrosine phosph... 32 1.8
Z84487-2|CAI42674.1| 2492|Homo sapiens alpha thalassemia/mental ... 30 7.4
Z84487-1|CAI42675.1| 2454|Homo sapiens alpha thalassemia/mental ... 30 7.4
U97103-1|AAC51657.1| 2375|Homo sapiens X-linked nuclear protein ... 30 7.4
U75653-1|AAC51655.1| 2492|Homo sapiens zinc finger helicase prot... 30 7.4
U72938-1|AAB49971.2| 2454|Homo sapiens putative DNA dependent AT... 30 7.4
U72937-1|AAB49970.2| 2492|Homo sapiens putative DNA dependent AT... 30 7.4
U72936-1|AAB49969.1| 2288|Homo sapiens putative DNA dependent AT... 30 7.4
U72935-3|AAB40700.1| 2288|Homo sapiens putative DNA dependent AT... 30 7.4
U72935-2|AAB40699.1| 2337|Homo sapiens putative DNA dependent AT... 30 7.4
U72935-1|AAB40698.1| 2375|Homo sapiens putative DNA dependent AT... 30 7.4
EF467914-1|ABO43036.1| 2492|Homo sapiens alpha thalassemia/menta... 30 7.4
BC044808-1|AAH44808.1| 440|Homo sapiens C14orf45 protein protein. 30 7.4
AL121874-2|CAI40710.1| 2492|Homo sapiens alpha thalassemia/menta... 30 7.4
AL121874-1|CAB90351.2| 2454|Homo sapiens alpha thalassemia/menta... 30 7.4
AL109753-2|CAI43115.1| 2492|Homo sapiens alpha thalassemia/menta... 30 7.4
AL109753-1|CAI43116.1| 2454|Homo sapiens alpha thalassemia/menta... 30 7.4
AB208928-1|BAD92165.1| 1383|Homo sapiens transcriptional regulat... 30 7.4
AB102641-1|BAC81110.1| 2492|Homo sapiens ATRX protein. 30 7.4
>Y00638-1|CAA68669.1| 1304|Homo sapiens protein ( Human mRNA for
leukocyte common antigen (T200). ).
Length = 1304
Score = 31.9 bits (69), Expect = 1.8
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +2
Query: 56 NAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIKSRGKDAHMIHEELV 235
++K DS Q E+ P ELI + + +LP+K S G H L+
Sbjct: 1106 HSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLI 1165
Query: 236 QLMKWKQARGKFYPQLSYLIKVNTPRAV-MQETKKAFRK 349
Q G F L+ L T V + + KA RK
Sbjct: 1166 HCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRK 1204
>Y00062-1|CAA68269.1| 1143|Homo sapiens protein ( Human mRNA for T200
leukocyte common antigen (CD45, LC-A). ).
Length = 1143
Score = 31.9 bits (69), Expect = 1.8
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +2
Query: 56 NAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIKSRGKDAHMIHEELV 235
++K DS Q E+ P ELI + + +LP+K S G H L+
Sbjct: 945 HSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLI 1004
Query: 236 QLMKWKQARGKFYPQLSYLIKVNTPRAV-MQETKKAFRK 349
Q G F L+ L T V + + KA RK
Sbjct: 1005 HCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRK 1043
>M23492-1|AAD15273.2| 1114|Homo sapiens T200 leukocyte common antigen
precursor protein.
Length = 1114
Score = 31.9 bits (69), Expect = 1.8
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +2
Query: 56 NAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIKSRGKDAHMIHEELV 235
++K DS Q E+ P ELI + + +LP+K S G H L+
Sbjct: 916 HSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLI 975
Query: 236 QLMKWKQARGKFYPQLSYLIKVNTPRAV-MQETKKAFRK 349
Q G F L+ L T V + + KA RK
Sbjct: 976 HCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRK 1014
>AL355988-3|CAI19378.1| 1306|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 1306
Score = 31.9 bits (69), Expect = 1.8
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +2
Query: 56 NAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIKSRGKDAHMIHEELV 235
++K DS Q E+ P ELI + + +LP+K S G H L+
Sbjct: 1108 HSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLI 1167
Query: 236 QLMKWKQARGKFYPQLSYLIKVNTPRAV-MQETKKAFRK 349
Q G F L+ L T V + + KA RK
Sbjct: 1168 HCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRK 1206
>AL355988-2|CAI19379.1| 1145|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 1145
Score = 31.9 bits (69), Expect = 1.8
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +2
Query: 56 NAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIKSRGKDAHMIHEELV 235
++K DS Q E+ P ELI + + +LP+K S G H L+
Sbjct: 947 HSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLI 1006
Query: 236 QLMKWKQARGKFYPQLSYLIKVNTPRAV-MQETKKAFRK 349
Q G F L+ L T V + + KA RK
Sbjct: 1007 HCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRK 1045
>AL157402-4|CAI15641.1| 1306|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 1306
Score = 31.9 bits (69), Expect = 1.8
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +2
Query: 56 NAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIKSRGKDAHMIHEELV 235
++K DS Q E+ P ELI + + +LP+K S G H L+
Sbjct: 1108 HSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLI 1167
Query: 236 QLMKWKQARGKFYPQLSYLIKVNTPRAV-MQETKKAFRK 349
Q G F L+ L T V + + KA RK
Sbjct: 1168 HCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRK 1206
>AL157402-3|CAI15640.1| 1145|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 1145
Score = 31.9 bits (69), Expect = 1.8
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +2
Query: 56 NAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIKSRGKDAHMIHEELV 235
++K DS Q E+ P ELI + + +LP+K S G H L+
Sbjct: 947 HSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLI 1006
Query: 236 QLMKWKQARGKFYPQLSYLIKVNTPRAV-MQETKKAFRK 349
Q G F L+ L T V + + KA RK
Sbjct: 1007 HCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRK 1045
>Z84487-2|CAI42674.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 29.9 bits (64), Expect = 7.4
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +2
Query: 2 RTFTMATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELP 181
R T + T T + +N+ E + Q + + +K KR +DN N+LP
Sbjct: 658 RVKTTPLRRPTETNPVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPNKLP 717
Query: 182 KKIKSRGKDAHMIHEELVQLMK 247
K +S D + +E++ ++K
Sbjct: 718 KSKQSETVDQNSDSDEMLAILK 739
>Z84487-1|CAI42675.1| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 29.9 bits (64), Expect = 7.4
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +2
Query: 2 RTFTMATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELP 181
R T + T T + +N+ E + Q + + +K KR +DN N+LP
Sbjct: 620 RVKTTPLRRPTETNPVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPNKLP 679
Query: 182 KKIKSRGKDAHMIHEELVQLMK 247
K +S D + +E++ ++K
Sbjct: 680 KSKQSETVDQNSDSDEMLAILK 701
>U97103-1|AAC51657.1| 2375|Homo sapiens X-linked nuclear protein
protein.
Length = 2375
Score = 29.9 bits (64), Expect = 7.4
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +2
Query: 2 RTFTMATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELP 181
R T + T T + +N+ E + Q + + +K KR +DN N+LP
Sbjct: 541 RVKTTPLRRPTETNPVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPNKLP 600
Query: 182 KKIKSRGKDAHMIHEELVQLMK 247
K +S D + +E++ ++K
Sbjct: 601 KSKQSETVDQNSDSDEMLAILK 622
>U75653-1|AAC51655.1| 2492|Homo sapiens zinc finger helicase
protein.
Length = 2492
Score = 29.9 bits (64), Expect = 7.4
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +2
Query: 2 RTFTMATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELP 181
R T + T T + +N+ E + Q + + +K KR +DN N+LP
Sbjct: 658 RVKTTPLRRPTETNPVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPNKLP 717
Query: 182 KKIKSRGKDAHMIHEELVQLMK 247
K +S D + +E++ ++K
Sbjct: 718 KSKQSETVDQNSDSDEMLAILK 739
>U72938-1|AAB49971.2| 2454|Homo sapiens putative DNA dependent
ATPase and helicase protein.
Length = 2454
Score = 29.9 bits (64), Expect = 7.4
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +2
Query: 2 RTFTMATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELP 181
R T + T T + +N+ E + Q + + +K KR +DN N+LP
Sbjct: 620 RVKTTPLRRPTETNPVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPNKLP 679
Query: 182 KKIKSRGKDAHMIHEELVQLMK 247
K +S D + +E++ ++K
Sbjct: 680 KSKQSETVDQNSDSDEMLAILK 701
>U72937-1|AAB49970.2| 2492|Homo sapiens putative DNA dependent
ATPase and helicase protein.
Length = 2492
Score = 29.9 bits (64), Expect = 7.4
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +2
Query: 2 RTFTMATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELP 181
R T + T T + +N+ E + Q + + +K KR +DN N+LP
Sbjct: 658 RVKTTPLRRPTETNPVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPNKLP 717
Query: 182 KKIKSRGKDAHMIHEELVQLMK 247
K +S D + +E++ ++K
Sbjct: 718 KSKQSETVDQNSDSDEMLAILK 739
>U72936-1|AAB49969.1| 2288|Homo sapiens putative DNA dependent
ATPase and helicase protein.
Length = 2288
Score = 29.9 bits (64), Expect = 7.4
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +2
Query: 2 RTFTMATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELP 181
R T + T T + +N+ E + Q + + +K KR +DN N+LP
Sbjct: 454 RVKTTPLRRPTETNPVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPNKLP 513
Query: 182 KKIKSRGKDAHMIHEELVQLMK 247
K +S D + +E++ ++K
Sbjct: 514 KSKQSETVDQNSDSDEMLAILK 535
>U72935-3|AAB40700.1| 2288|Homo sapiens putative DNA dependent
ATPase and helicase protein.
Length = 2288
Score = 29.9 bits (64), Expect = 7.4
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +2
Query: 2 RTFTMATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELP 181
R T + T T + +N+ E + Q + + +K KR +DN N+LP
Sbjct: 454 RVKTTPLRRPTETNPVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPNKLP 513
Query: 182 KKIKSRGKDAHMIHEELVQLMK 247
K +S D + +E++ ++K
Sbjct: 514 KSKQSETVDQNSDSDEMLAILK 535
>U72935-2|AAB40699.1| 2337|Homo sapiens putative DNA dependent
ATPase and helicase protein.
Length = 2337
Score = 29.9 bits (64), Expect = 7.4
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +2
Query: 2 RTFTMATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELP 181
R T + T T + +N+ E + Q + + +K KR +DN N+LP
Sbjct: 503 RVKTTPLRRPTETNPVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPNKLP 562
Query: 182 KKIKSRGKDAHMIHEELVQLMK 247
K +S D + +E++ ++K
Sbjct: 563 KSKQSETVDQNSDSDEMLAILK 584
>U72935-1|AAB40698.1| 2375|Homo sapiens putative DNA dependent
ATPase and helicase protein.
Length = 2375
Score = 29.9 bits (64), Expect = 7.4
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +2
Query: 2 RTFTMATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELP 181
R T + T T + +N+ E + Q + + +K KR +DN N+LP
Sbjct: 541 RVKTTPLRRPTETNPVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPNKLP 600
Query: 182 KKIKSRGKDAHMIHEELVQLMK 247
K +S D + +E++ ++K
Sbjct: 601 KSKQSETVDQNSDSDEMLAILK 622
>EF467914-1|ABO43036.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked protein.
Length = 2492
Score = 29.9 bits (64), Expect = 7.4
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +2
Query: 2 RTFTMATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELP 181
R T + T T + +N+ E + Q + + +K KR +DN N+LP
Sbjct: 658 RVKTTPLRRPTETNPVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPNKLP 717
Query: 182 KKIKSRGKDAHMIHEELVQLMK 247
K +S D + +E++ ++K
Sbjct: 718 KSKQSETVDQNSDSDEMLAILK 739
>BC044808-1|AAH44808.1| 440|Homo sapiens C14orf45 protein protein.
Length = 440
Score = 29.9 bits (64), Expect = 7.4
Identities = 21/97 (21%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Frame = +2
Query: 44 FLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIKSRGKDAHMIH 223
+L+ +E D++++ Q + E+ + D+L + NEL + + K+ MIH
Sbjct: 84 YLKKQDQEKDNMIEKLKQQLNETKEKAQEEKDKLEQKYTRQINELEGQFHQKAKEIGMIH 143
Query: 224 EELVQLMKWKQARGKFYPQLSYLIK-VNTPRAVMQET 331
EL + ++++ + + +L L + + + QET
Sbjct: 144 TELKAVRQFQKRKIQVERELDDLKENLRNTERIHQET 180
>AL121874-2|CAI40710.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 29.9 bits (64), Expect = 7.4
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +2
Query: 2 RTFTMATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELP 181
R T + T T + +N+ E + Q + + +K KR +DN N+LP
Sbjct: 658 RVKTTPLRRPTETNPVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPNKLP 717
Query: 182 KKIKSRGKDAHMIHEELVQLMK 247
K +S D + +E++ ++K
Sbjct: 718 KSKQSETVDQNSDSDEMLAILK 739
>AL121874-1|CAB90351.2| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 29.9 bits (64), Expect = 7.4
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +2
Query: 2 RTFTMATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELP 181
R T + T T + +N+ E + Q + + +K KR +DN N+LP
Sbjct: 620 RVKTTPLRRPTETNPVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPNKLP 679
Query: 182 KKIKSRGKDAHMIHEELVQLMK 247
K +S D + +E++ ++K
Sbjct: 680 KSKQSETVDQNSDSDEMLAILK 701
>AL109753-2|CAI43115.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 29.9 bits (64), Expect = 7.4
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +2
Query: 2 RTFTMATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELP 181
R T + T T + +N+ E + Q + + +K KR +DN N+LP
Sbjct: 658 RVKTTPLRRPTETNPVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPNKLP 717
Query: 182 KKIKSRGKDAHMIHEELVQLMK 247
K +S D + +E++ ++K
Sbjct: 718 KSKQSETVDQNSDSDEMLAILK 739
>AL109753-1|CAI43116.1| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 29.9 bits (64), Expect = 7.4
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +2
Query: 2 RTFTMATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELP 181
R T + T T + +N+ E + Q + + +K KR +DN N+LP
Sbjct: 620 RVKTTPLRRPTETNPVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPNKLP 679
Query: 182 KKIKSRGKDAHMIHEELVQLMK 247
K +S D + +E++ ++K
Sbjct: 680 KSKQSETVDQNSDSDEMLAILK 701
>AB208928-1|BAD92165.1| 1383|Homo sapiens transcriptional regulator
ATRX isoform 2 variant protein.
Length = 1383
Score = 29.9 bits (64), Expect = 7.4
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +2
Query: 2 RTFTMATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELP 181
R T + T T + +N+ E + Q + + +K KR +DN N+LP
Sbjct: 623 RVKTTPLRRPTETNPVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPNKLP 682
Query: 182 KKIKSRGKDAHMIHEELVQLMK 247
K +S D + +E++ ++K
Sbjct: 683 KSKQSETVDQNSDSDEMLAILK 704
>AB102641-1|BAC81110.1| 2492|Homo sapiens ATRX protein.
Length = 2492
Score = 29.9 bits (64), Expect = 7.4
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +2
Query: 2 RTFTMATAKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELP 181
R T + T T + +N+ E + Q + + +K KR +DN N+LP
Sbjct: 658 RVKTTPLRRPTETNPVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPNKLP 717
Query: 182 KKIKSRGKDAHMIHEELVQLMK 247
K +S D + +E++ ++K
Sbjct: 718 KSKQSETVDQNSDSDEMLAILK 739
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,251,476
Number of Sequences: 237096
Number of extensions: 2008405
Number of successful extensions: 4159
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4159
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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