Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25f17
         (643 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023211-1|AAY55627.1|  425|Drosophila melanogaster IP10727p pro...    83   4e-16
AE013599-2989|AAF57488.2|  425|Drosophila melanogaster CG11788-P...    83   4e-16
AE014298-2607|AAF48760.1|  607|Drosophila melanogaster CG15816-P...    29   7.1  

>BT023211-1|AAY55627.1|  425|Drosophila melanogaster IP10727p
           protein.
          Length = 425

 Score = 82.6 bits (195), Expect = 4e-16
 Identities = 50/159 (31%), Positives = 70/159 (44%)
 Frame = +1

Query: 154 RTPEDVXKIIKTAKLHESELTEVSQILRFPPQNKENXXXXXXXXXXXXXKEIEAGNQLIF 333
           RTPEDV  I+K AKL E +LT+++Q L FP  + ++              +I  G  L F
Sbjct: 16  RTPEDVKAIVKHAKLDERQLTQLTQALYFPSADVDSDNLRLLELDGHMLGQIRDGQTLYF 75

Query: 334 KGDSEESVVLCTENKTYDVKEAETSNSXXXXXXXXFSASTGLDETIQNNSMEXXXXXXXX 513
           KG   E +VLCT+ +TYDVK AE SNS        F+A+T                    
Sbjct: 76  KGGQNEKLVLCTDERTYDVKGAEISNSLLLVPDLKFAAATSTSPL-----KSPRTGNANA 130

Query: 514 XXXXXXXXXXXXEGRTPRRIEHKDIVNTFFTYYELKPCK 630
                       E   PR +E + ++  F  Y+E +  K
Sbjct: 131 SLERSLNDSTEDELEVPRTLEQRPVLKVFHEYFECREIK 169


>AE013599-2989|AAF57488.2|  425|Drosophila melanogaster CG11788-PA
           protein.
          Length = 425

 Score = 82.6 bits (195), Expect = 4e-16
 Identities = 50/159 (31%), Positives = 70/159 (44%)
 Frame = +1

Query: 154 RTPEDVXKIIKTAKLHESELTEVSQILRFPPQNKENXXXXXXXXXXXXXKEIEAGNQLIF 333
           RTPEDV  I+K AKL E +LT+++Q L FP  + ++              +I  G  L F
Sbjct: 16  RTPEDVKAIVKHAKLDERQLTQLTQALYFPSADVDSDNLRLLELDGHMLGQIRDGQTLYF 75

Query: 334 KGDSEESVVLCTENKTYDVKEAETSNSXXXXXXXXFSASTGLDETIQNNSMEXXXXXXXX 513
           KG   E +VLCT+ +TYDVK AE SNS        F+A+T                    
Sbjct: 76  KGGQNEKLVLCTDERTYDVKGAEISNSLLLVPDLKFAAATSTSPL-----KSPRTGNANA 130

Query: 514 XXXXXXXXXXXXEGRTPRRIEHKDIVNTFFTYYELKPCK 630
                       E   PR +E + ++  F  Y+E +  K
Sbjct: 131 SLERSLNDSTEDELEVPRTLEQRPVLKVFHEYFECREIK 169


>AE014298-2607|AAF48760.1|  607|Drosophila melanogaster CG15816-PA
           protein.
          Length = 607

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 22/73 (30%), Positives = 32/73 (43%)
 Frame = -3

Query: 455 PVDAENNKSGSNSKLFDVSASLTS*VLFSVHSTTLSSESPLKINWFPASISFKRTSSSNI 276
           P D    KS SN+ L   S SLT+    S  S +L   S +K      S  F+R + S +
Sbjct: 58  PADHLVQKSSSNTSLSSNSNSLTNSETKSSKSYSLRKSSSVKSGVAKVSALFERKTPSKM 117

Query: 275 NRKLSFSLFCGGN 237
           +    F+    G+
Sbjct: 118 SPPCGFNWSISGS 130


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,275,590
Number of Sequences: 53049
Number of extensions: 343503
Number of successful extensions: 709
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)