Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25f14
         (699 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical pr...   150   8e-37
AF099915-3|AAC68766.1|  475|Caenorhabditis elegans Hypothetical ...   147   6e-36
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    32   0.45 
Z81536-9|CAB04362.1|  733|Caenorhabditis elegans Hypothetical pr...    31   0.79 
Z68215-1|CAA92450.1|  517|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AL032626-2|CAA21539.1|  571|Caenorhabditis elegans Hypothetical ...    29   3.2  
AC199167-2|ABO33246.1|  222|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z74033-10|CAA98478.1|  805|Caenorhabditis elegans Hypothetical p...    28   5.6  
AL022272-5|CAA18355.1|  805|Caenorhabditis elegans Hypothetical ...    28   5.6  

>U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical
           protein C50F7.10 protein.
          Length = 479

 Score =  150 bits (364), Expect = 8e-37
 Identities = 72/164 (43%), Positives = 104/164 (63%), Gaps = 1/164 (0%)
 Frame = +1

Query: 40  FPRWFKFGAATSSYQIEGSWNVSDKTPSTWDDYTHTQPHRIKDHSNGDVACDSYNQYEKD 219
           FP+ F+   AT++YQIEG+ N+  +  STWD    ++  RI D+S+ D++C+   +Y++D
Sbjct: 7   FPKNFQLATATAAYQIEGAKNLDGRGFSTWDSI-RSENGRIHDNSDPDLSCEGRLKYKED 65

Query: 220 IEMAEQLGLDFYRFSISWPRLLPKGFRTRISADGRQYYDNLINGLLDRGIEPMVTLYHSD 399
           + +  ++G+  YRFSISW R+LP G    I+ DG Q+Y ++   L D GIEP+VTL+H D
Sbjct: 66  VALLSKIGVTSYRFSISWSRILPDGTLKTINEDGIQFYRDICLLLRDNGIEPIVTLFHFD 125

Query: 400 MPKIFQDLG-GWANPEMAEWFADYADVAFSLYGDRVKLWITINE 528
           MP    D G  W N E  E F  +AD+ F  +GD VK WIT NE
Sbjct: 126 MPLSIYDNGTSWLNKENCEHFEKFADLCFQKFGDLVKTWITFNE 169


>AF099915-3|AAC68766.1|  475|Caenorhabditis elegans Hypothetical
           protein E02H9.5 protein.
          Length = 475

 Score =  147 bits (357), Expect = 6e-36
 Identities = 71/164 (43%), Positives = 105/164 (64%), Gaps = 1/164 (0%)
 Frame = +1

Query: 40  FPRWFKFGAATSSYQIEGSWNVSDKTPSTWDDYTHTQPHRIKDHSNGDVACDSYNQYEKD 219
           FP+ FK   AT++YQIEG+ +++ +  STWD     +P RI D+S+ D++CD   +Y++D
Sbjct: 7   FPKNFKLATATAAYQIEGAKDLNGRGFSTWDAI-RLEPGRILDNSDPDLSCDGLLKYKED 65

Query: 220 IEMAEQLGLDFYRFSISWPRLLPKGFRTRISADGRQYYDNLINGLLDRGIEPMVTLYHSD 399
           + +  ++G+  YRFSISW R+LP G  + I+ +G ++Y +L   L +  IEP+VTL+H D
Sbjct: 66  VALLAEIGVTNYRFSISWSRILPDGTLSTINEEGIKFYRDLCLLLKENNIEPVVTLFHFD 125

Query: 400 MPKIFQDLG-GWANPEMAEWFADYADVAFSLYGDRVKLWITINE 528
           MP    D G  W N E  E F  +AD+ F  +GD VK WIT NE
Sbjct: 126 MPLAIYDNGTAWLNRENCEHFEKFADLCFQKFGDLVKTWITYNE 169


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical protein
            K10G4.5 protein.
          Length = 1251

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
 Frame = +1

Query: 73   SSYQIEGSWNV--SDKTPSTWDDYTHTQPHRIKDHSNGDVACDSYNQ-YEKDIE-----M 228
            +S+  E ++ V   DK   TW  Y   QP RIK+    DV CD      EK+ E     +
Sbjct: 813  TSWNKESAFEVFYRDKGKDTWIMYEPYQPIRIKNRDCMDVLCDEMKHILEKNPEKLNEFI 872

Query: 229  AEQLGLD 249
             EQ+G D
Sbjct: 873  VEQMGFD 879



 Score = 30.7 bits (66), Expect = 1.0
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = +1

Query: 112 KTPSTWDDYTHTQPHRIKDHSNGDVACDSYN-QYEKDIEMAEQLGLDFYR 258
           +T  TW  Y   QP +IKD    DV CD        + E   Q  ++F R
Sbjct: 116 RTNDTWITYEPQQPIKIKDRDCIDVMCDDLEIMLNSECEKLFQFVIEFCR 165


>Z81536-9|CAB04362.1|  733|Caenorhabditis elegans Hypothetical
           protein F40D4.12 protein.
          Length = 733

 Score = 31.1 bits (67), Expect = 0.79
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = +1

Query: 112 KTPSTWDDYTHTQPHRIKDHSNGDVACD 195
           KT  TW  Y   QP +IKD    DV CD
Sbjct: 51  KTDDTWITYEPRQPIKIKDRGCIDVLCD 78


>Z68215-1|CAA92450.1|  517|Caenorhabditis elegans Hypothetical
           protein C53B4.1 protein.
          Length = 517

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 478 LRPRNRQTILPFQDWPNLPNLEISSAYLN 392
           + P  R  IL F +WPN   +++  AY++
Sbjct: 195 ISPNRRLRILAFSNWPNARMIQVGLAYIS 223


>AL032626-2|CAA21539.1|  571|Caenorhabditis elegans Hypothetical
           protein Y37D8A.2 protein.
          Length = 571

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 318 VRTDASAESFRQQSWPGYRKP 256
           V +D +A  FR+  WPGY +P
Sbjct: 368 VHSDKTAHLFRETYWPGYNQP 388


>AC199167-2|ABO33246.1|  222|Caenorhabditis elegans Hypothetical
           protein cTel55X.1a protein.
          Length = 222

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 361 RGIEPMVTLYHSDMPKIFQDLGGWANPEMAEWFADY 468
           +GI   VTLY  D+  +F   G WA P + E  A +
Sbjct: 149 KGIAVFVTLYLIDLHYVFYTSGFWAYPILGELAAPF 184


>Z74033-10|CAA98478.1|  805|Caenorhabditis elegans Hypothetical
           protein H12C20.2a protein.
          Length = 805

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 405 EDISRFGRLGQS*NGRMVCRLRGRSFLSVRRQSE 506
           +D S+   +GQ  +G ++CRLRG  F+  +  S+
Sbjct: 614 DDFSKMKIIGQFNHGFIICRLRGHLFIVDQHASD 647


>AL022272-5|CAA18355.1|  805|Caenorhabditis elegans Hypothetical
           protein H12C20.2a protein.
          Length = 805

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 405 EDISRFGRLGQS*NGRMVCRLRGRSFLSVRRQSE 506
           +D S+   +GQ  +G ++CRLRG  F+  +  S+
Sbjct: 614 DDFSKMKIIGQFNHGFIICRLRGHLFIVDQHASD 647


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,957,138
Number of Sequences: 27780
Number of extensions: 367209
Number of successful extensions: 941
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)