Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25f01
         (660 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ529299-1|ABF71985.1|  431|Homo sapiens TTG1A protein.                66   1e-10
DQ323046-1|ABC50092.1|  454|Homo sapiens TTG1 protein.                 65   2e-10
BC003397-1|AAH03397.2|  454|Homo sapiens chromosome 1 open readi...    65   2e-10
AY854248-1|AAW30011.1|  454|Homo sapiens odorant response abnorm...    65   2e-10
AL596220-3|CAI13121.1|  454|Homo sapiens chromosome 1 open readi...    65   2e-10
AK000512-1|BAA91218.1|  335|Homo sapiens protein ( Homo sapiens ...    65   2e-10
AK026086-1|BAB15356.1|  373|Homo sapiens protein ( Homo sapiens ...    35   0.22 

>DQ529299-1|ABF71985.1|  431|Homo sapiens TTG1A protein.
          Length = 431

 Score = 66.1 bits (154), Expect = 1e-10
 Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 3/163 (1%)
 Frame = +3

Query: 180 MPRTVYSPEHCLQYLEQYASK-EIFAIGLILGQMTDARENVIHLARTPEEKGSEIGIESN 356
           M RT    E   QYL     + + F  GL++GQ +  ++ VI   RTP  KG +     N
Sbjct: 1   MGRTYIVEETVGQYLSNINLQGKAFVSGLLIGQCSSQKDYVILATRTPP-KGEQ---SEN 56

Query: 357 YGLDKSEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRS 536
               K++    L ++ E W  +HA  V+RMLPGG+ V G+F+ +  ++  D    + LR 
Sbjct: 57  LKHPKAK----LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELANDSQ--NALRR 110

Query: 537 TLNHIYKGLSINEYMFGNCPYS--NERLILHMSTSTKVLTCKS 659
            +  + K  SIN     N      +ER+ LH+  STK + C++
Sbjct: 111 LMFAVEK--SINRKRLWNFTEEEVSERVTLHICASTKKIFCRT 151


>DQ323046-1|ABC50092.1|  454|Homo sapiens TTG1 protein.
          Length = 454

 Score = 64.9 bits (151), Expect = 2e-10
 Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 3/163 (1%)
 Frame = +3

Query: 180 MPRTVYSPEHCLQYLEQYASK-EIFAIGLILGQMTDARENVIHLARTPEEKGSEIGIESN 356
           M RT    E   QYL     + + F  GL++GQ +  ++ VI   RTP ++      E +
Sbjct: 1   MGRTYIVEETVGQYLSNINLQGKAFVSGLLIGQCSSQKDYVILATRTPPKE------EQS 54

Query: 357 YGLDKSEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRS 536
             L K   AK L ++ E W  +HA  V+RMLPGG+ V G+F+ +  ++  D    + LR 
Sbjct: 55  ENL-KHPKAK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELANDFQ--NALRR 110

Query: 537 TLNHIYKGLSINEYMFGNCPYS--NERLILHMSTSTKVLTCKS 659
            +  + K  SIN     N      +ER+ LH+  STK + C++
Sbjct: 111 LMFAVEK--SINRKRLWNFTEEEVSERVTLHICASTKKIFCRT 151


>BC003397-1|AAH03397.2|  454|Homo sapiens chromosome 1 open reading
           frame 27 protein.
          Length = 454

 Score = 64.9 bits (151), Expect = 2e-10
 Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 3/163 (1%)
 Frame = +3

Query: 180 MPRTVYSPEHCLQYLEQYASK-EIFAIGLILGQMTDARENVIHLARTPEEKGSEIGIESN 356
           M RT    E   QYL     + + F  GL++GQ +  ++ VI   RTP ++      E +
Sbjct: 1   MGRTYIVEETVGQYLSNINLQGKAFVSGLLIGQCSSQKDYVILATRTPPKE------EQS 54

Query: 357 YGLDKSEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRS 536
             L K   AK L ++ E W  +HA  V+RMLPGG+ V G+F+ +  ++  D    + LR 
Sbjct: 55  ENL-KHPKAK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELANDFQ--NALRR 110

Query: 537 TLNHIYKGLSINEYMFGNCPYS--NERLILHMSTSTKVLTCKS 659
            +  + K  SIN     N      +ER+ LH+  STK + C++
Sbjct: 111 LMFAVEK--SINRKRLWNFTEEEVSERVTLHICASTKKIFCRT 151


>AY854248-1|AAW30011.1|  454|Homo sapiens odorant response abnormal
           4 protein protein.
          Length = 454

 Score = 64.9 bits (151), Expect = 2e-10
 Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 3/163 (1%)
 Frame = +3

Query: 180 MPRTVYSPEHCLQYLEQYASK-EIFAIGLILGQMTDARENVIHLARTPEEKGSEIGIESN 356
           M RT    E   QYL     + + F  GL++GQ +  ++ VI   RTP ++      E +
Sbjct: 1   MGRTYIVEETVGQYLSNINLQGKAFVSGLLIGQCSSQKDYVILATRTPPKE------EQS 54

Query: 357 YGLDKSEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRS 536
             L K   AK L ++ E W  +HA  V+RMLPGG+ V G+F+ +  ++  D    + LR 
Sbjct: 55  ENL-KHPKAK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELANDFQ--NALRR 110

Query: 537 TLNHIYKGLSINEYMFGNCPYS--NERLILHMSTSTKVLTCKS 659
            +  + K  SIN     N      +ER+ LH+  STK + C++
Sbjct: 111 LMFAVEK--SINRKRLWNFTEEEVSERVTLHICASTKKIFCRT 151


>AL596220-3|CAI13121.1|  454|Homo sapiens chromosome 1 open reading
           frame 27 protein.
          Length = 454

 Score = 64.9 bits (151), Expect = 2e-10
 Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 3/163 (1%)
 Frame = +3

Query: 180 MPRTVYSPEHCLQYLEQYASK-EIFAIGLILGQMTDARENVIHLARTPEEKGSEIGIESN 356
           M RT    E   QYL     + + F  GL++GQ +  ++ VI   RTP ++      E +
Sbjct: 1   MGRTYIVEETVGQYLSNINLQGKAFVSGLLIGQCSSQKDYVILATRTPPKE------EQS 54

Query: 357 YGLDKSEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRS 536
             L K   AK L ++ E W  +HA  V+RMLPGG+ V G+F+ +  ++  D    + LR 
Sbjct: 55  ENL-KHPKAK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELANDFQ--NALRR 110

Query: 537 TLNHIYKGLSINEYMFGNCPYS--NERLILHMSTSTKVLTCKS 659
            +  + K  SIN     N      +ER+ LH+  STK + C++
Sbjct: 111 LMFAVEK--SINRKRLWNFTEEEVSERVTLHICASTKKIFCRT 151


>AK000512-1|BAA91218.1|  335|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20505 fis, clone KAT09459. ).
          Length = 335

 Score = 64.9 bits (151), Expect = 2e-10
 Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 3/163 (1%)
 Frame = +3

Query: 180 MPRTVYSPEHCLQYLEQYASK-EIFAIGLILGQMTDARENVIHLARTPEEKGSEIGIESN 356
           M RT    E   QYL     + + F  GL++GQ +  ++ VI   RTP ++      E +
Sbjct: 1   MGRTYIVEETVGQYLSNINLQGKAFVSGLLIGQCSSQKDYVILATRTPPKE------EQS 54

Query: 357 YGLDKSEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRS 536
             L K   AK L ++ E W  +HA  V+RMLPGG+ V G+F+ +  ++  D    + LR 
Sbjct: 55  ENL-KHPKAK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELANDFQ--NALRR 110

Query: 537 TLNHIYKGLSINEYMFGNCPYS--NERLILHMSTSTKVLTCKS 659
            +  + K  SIN     N      +ER+ LH+  STK + C++
Sbjct: 111 LMFAVEK--SINRKRLWNFTEEEVSERVTLHICASTKKIFCRT 151


>AK026086-1|BAB15356.1|  373|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22433 fis, clone HRC09172. ).
          Length = 373

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
 Frame = +3

Query: 444 MLPGGMFVQGIFVTSDEDVFEDPNCFSKLRSTLNHIYKGLSINEYMFGNCPYS--NERLI 617
           MLPGG+ V G+F+ +  ++  D    + LR  +  + K  SIN     N      +ER+ 
Sbjct: 1   MLPGGLLVLGVFIITTLELANDFQ--NALRRLMFAVEK--SINRKRLWNFTEEEVSERVT 56

Query: 618 LHMSTSTKVLTCKS 659
           LH+  STK + C++
Sbjct: 57  LHICASTKKIFCRT 70


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,859,559
Number of Sequences: 237096
Number of extensions: 1785391
Number of successful extensions: 3387
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3374
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)