Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25f01
         (660 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2143|AAF49917.2|  492|Drosophila melanogaster CG10616-P...    55   7e-08

>AE014296-2143|AAF49917.2|  492|Drosophila melanogaster CG10616-PA
           protein.
          Length = 492

 Score = 55.2 bits (127), Expect = 7e-08
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
 Frame = +3

Query: 186 RTVYSPEHCLQYLEQYASKEIFAIGLILGQMTDAREN-VIHLARTPEEKGSEIGIESNYG 362
           RTV   +H   YLE+ A +  F+ G+I+G   D  ++ V+HLAR  EE   +  +E    
Sbjct: 2   RTVLLSKHDELYLEKCAQENQFSYGIIVGHQADLTKSVVVHLARNNEE---DADLE---- 54

Query: 363 LDKSEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTS-DEDVFEDPNC-FSKLRS 536
            D SE+   +S ++   +A      ++M PG   V GIFV+S   DV  + +  F   + 
Sbjct: 55  -DLSEVRLTISDINSQALASQWLSASKMCPGSFDVIGIFVSSVRSDVVNEQSAEFKNAKK 113

Query: 537 TLNHIYKGLSINEYMFG 587
             + IY  L  +   FG
Sbjct: 114 LFSDIYDLLLKSNSSFG 130


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,143,259
Number of Sequences: 53049
Number of extensions: 530669
Number of successful extensions: 1108
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)