Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25f01
(660 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant respons... 44 7e-05
U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant respons... 44 7e-05
U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant respons... 44 7e-05
AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant respo... 44 7e-05
Z30215-7|CAA82940.1| 322|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z29560-13|CAA82665.1| 322|Caenorhabditis elegans Hypothetical p... 29 2.2
AC084158-40|AAM15618.2| 354|Caenorhabditis elegans Hypothetical... 29 3.9
AC084158-39|AAM15616.2| 483|Caenorhabditis elegans Hypothetical... 29 3.9
AC084158-38|AAM15617.2| 488|Caenorhabditis elegans Hypothetical... 29 3.9
AC084158-37|AAM15615.2| 486|Caenorhabditis elegans Hypothetical... 29 3.9
Z84574-3|CAB06540.2| 172|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical p... 27 8.9
>U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant response
abnormal protein4, isoform a protein.
Length = 445
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +3
Query: 399 VSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRSTLNHIYK 557
+ + W++DHA + RMLPGG+ V GI SD+ F D S + TL I K
Sbjct: 71 LEDEWMSDHAERLLRMLPGGIHVVGIAWFSDKKTFSDRK--SHIHKTLGRIQK 121
>U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant response
abnormal protein4, isoform c protein.
Length = 473
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +3
Query: 399 VSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRSTLNHIYK 557
+ + W++DHA + RMLPGG+ V GI SD+ F D S + TL I K
Sbjct: 101 LEDEWMSDHAERLLRMLPGGIHVVGIAWFSDKKTFSDRK--SHIHKTLGRIQK 151
>U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant response
abnormal protein4, isoform b protein.
Length = 475
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +3
Query: 399 VSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRSTLNHIYK 557
+ + W++DHA + RMLPGG+ V GI SD+ F D S + TL I K
Sbjct: 103 LEDEWMSDHAERLLRMLPGGIHVVGIAWFSDKKTFSDRK--SHIHKTLGRIQK 153
>AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant response
protein ODR-4 protein.
Length = 445
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +3
Query: 399 VSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRSTLNHIYK 557
+ + W++DHA + RMLPGG+ V GI SD+ F D S + TL I K
Sbjct: 71 LEDEWMSDHAERLLRMLPGGIHVVGIAWFSDKKTFSDRK--SHIHKTLGRIQK 121
>Z30215-7|CAA82940.1| 322|Caenorhabditis elegans Hypothetical
protein K03H1.10 protein.
Length = 322
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = -3
Query: 586 PNIYSLILKPLYMWLRVDRNLLKQLGSSKTSSSLVTNMP*TNIPPGSILVTCRAW 422
P++ +LI + D ++ Q+G S S+ +TN +N+PP ++ V + W
Sbjct: 115 PHLANLIGTKGNSYGSADGEVVHQIGVSTMSAGRITNGNISNLPPPNVPVRTKEW 169
>Z29560-13|CAA82665.1| 322|Caenorhabditis elegans Hypothetical
protein K03H1.10 protein.
Length = 322
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = -3
Query: 586 PNIYSLILKPLYMWLRVDRNLLKQLGSSKTSSSLVTNMP*TNIPPGSILVTCRAW 422
P++ +LI + D ++ Q+G S S+ +TN +N+PP ++ V + W
Sbjct: 115 PHLANLIGTKGNSYGSADGEVVHQIGVSTMSAGRITNGNISNLPPPNVPVRTKEW 169
>AC084158-40|AAM15618.2| 354|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1d protein.
Length = 354
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +3
Query: 513 NCFSKLRSTLNHIYKGLSINEYMFGNCPYSNERLILHMSTSTKVLTCK 656
N F LR+ L + K +SIN+ +F N P L K TCK
Sbjct: 132 NTFKSLRTRLYSLPKTVSINKLVFSNTPECEAEDCLIELMFIKKWTCK 179
>AC084158-39|AAM15616.2| 483|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1b protein.
Length = 483
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +3
Query: 513 NCFSKLRSTLNHIYKGLSINEYMFGNCPYSNERLILHMSTSTKVLTCK 656
N F LR+ L + K +SIN+ +F N P L K TCK
Sbjct: 132 NTFKSLRTRLYSLPKTVSINKLVFSNTPECEAEDCLIELMFIKKWTCK 179
>AC084158-38|AAM15617.2| 488|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1c protein.
Length = 488
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +3
Query: 513 NCFSKLRSTLNHIYKGLSINEYMFGNCPYSNERLILHMSTSTKVLTCK 656
N F LR+ L + K +SIN+ +F N P L K TCK
Sbjct: 137 NTFKSLRTRLYSLPKTVSINKLVFSNTPECEAEDCLIELMFIKKWTCK 184
>AC084158-37|AAM15615.2| 486|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1a protein.
Length = 486
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +3
Query: 513 NCFSKLRSTLNHIYKGLSINEYMFGNCPYSNERLILHMSTSTKVLTCK 656
N F LR+ L + K +SIN+ +F N P L K TCK
Sbjct: 135 NTFKSLRTRLYSLPKTVSINKLVFSNTPECEAEDCLIELMFIKKWTCK 182
>Z84574-3|CAB06540.2| 172|Caenorhabditis elegans Hypothetical
protein F33E2.4 protein.
Length = 172
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +3
Query: 576 YMFGNCPYSNERLILHMSTSTK-VLTCK 656
Y++ + P NE+LI H T+T+ +LTC+
Sbjct: 122 YLYADTPSVNEQLIKHDLTNTEAILTCQ 149
>Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical
protein F26D2.10 protein.
Length = 1213
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 306 LARTPEEKGSEIGIESNYGLDKSEIAKNLSSVSEAWIADHARHV 437
L R E+K IG+++N+ D + I NLS + E I + +H+
Sbjct: 367 LMRLSEKKMHPIGLKANFVADVATIGLNLSEL-ERVIHESGKHI 409
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,432,435
Number of Sequences: 27780
Number of extensions: 291948
Number of successful extensions: 716
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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