Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25e23
         (554 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051823-1|AAK93247.1|  439|Drosophila melanogaster LD33178p pro...   122   4e-28
AE014297-2018|AAF55177.2|  439|Drosophila melanogaster CG31301-P...   122   4e-28
BT024459-1|ABC86521.1|  882|Drosophila melanogaster AT20596p pro...    30   1.8  
BT003798-1|AAO41481.1|  927|Drosophila melanogaster AT25231p pro...    30   1.8  
AL031863-5|CAA21319.1|  638|Drosophila melanogaster EG:EG0003.6 ...    30   1.8  
AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB...    30   1.8  
AE014296-640|AAF47760.1|  882|Drosophila melanogaster CG11526-PA...    30   1.8  
AE014296-639|AAN11560.2|  927|Drosophila melanogaster CG11526-PB...    30   1.8  
M32078-4|AAB59192.1| 2077|Drosophila melanogaster sodium channel...    28   7.4  
AE014297-3327|AAF56136.1|  858|Drosophila melanogaster CG4374-PA...    28   9.7  

>AY051823-1|AAK93247.1|  439|Drosophila melanogaster LD33178p
           protein.
          Length = 439

 Score =  122 bits (293), Expect = 4e-28
 Identities = 52/94 (55%), Positives = 75/94 (79%)
 Frame = +3

Query: 117 DVDSLRTEHESEEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMKRIS 296
           DVDS +TE+ES+E W++RRSF+L HKD F E  LV LAQ + N+EF+GC+YP  TM  ++
Sbjct: 33  DVDSYKTEYESDEHWDLRRSFMLAHKDRFEEDRLVCLAQTFVNMEFMGCKYPSATMLLVA 92

Query: 297 VLAEKVSAKYKESRKNKLKRTFVQASDAAEQKAK 398
            L+++++A +++ R+ +LKRTFV ASDAAEQ+AK
Sbjct: 93  ELSKEIAADFRQKREQRLKRTFVSASDAAEQRAK 126


>AE014297-2018|AAF55177.2|  439|Drosophila melanogaster CG31301-PA
           protein.
          Length = 439

 Score =  122 bits (293), Expect = 4e-28
 Identities = 52/94 (55%), Positives = 75/94 (79%)
 Frame = +3

Query: 117 DVDSLRTEHESEEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMKRIS 296
           DVDS +TE+ES+E W++RRSF+L HKD F E  LV LAQ + N+EF+GC+YP  TM  ++
Sbjct: 33  DVDSYKTEYESDEHWDLRRSFMLAHKDRFEEDRLVCLAQTFVNMEFMGCKYPSATMLLVA 92

Query: 297 VLAEKVSAKYKESRKNKLKRTFVQASDAAEQKAK 398
            L+++++A +++ R+ +LKRTFV ASDAAEQ+AK
Sbjct: 93  ELSKEIAADFRQKREQRLKRTFVSASDAAEQRAK 126


>BT024459-1|ABC86521.1|  882|Drosophila melanogaster AT20596p
           protein.
          Length = 882

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
 Frame = +3

Query: 114 IDVDSLRTEHE--SEEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMK 287
           I  +++R E E  SE+  E+  SF+ E     P+ EL+ +  +     F     P   MK
Sbjct: 184 IITETIRDEKEKGSEDYRELADSFVQEINSPLPDGELLAVKLLGMITRFCSGAAPQFPMK 243

Query: 288 RISVLAEKVS 317
           ++ +L  KVS
Sbjct: 244 KVVLLLWKVS 253


>BT003798-1|AAO41481.1|  927|Drosophila melanogaster AT25231p
           protein.
          Length = 927

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
 Frame = +3

Query: 114 IDVDSLRTEHE--SEEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMK 287
           I  +++R E E  SE+  E+  SF+ E     P+ EL+ +  +     F     P   MK
Sbjct: 229 IITETIRDEKEKGSEDYRELADSFVQEINSPLPDGELLAVKLLGMITRFCSGAAPQFPMK 288

Query: 288 RISVLAEKVS 317
           ++ +L  KVS
Sbjct: 289 KVVLLLWKVS 298


>AL031863-5|CAA21319.1|  638|Drosophila melanogaster EG:EG0003.6
           protein.
          Length = 638

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 21/73 (28%), Positives = 32/73 (43%)
 Frame = +3

Query: 180 LLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMKRISVLAEKVSAKYKESRKNKLKRT 359
           LL   D+  E E+   A +   I  +  RYP    +R+S +   + AKY+E  K   K  
Sbjct: 518 LLRQLDEGVEDEVQLPASVKIQIAKMR-RYPRMKRRRMSPILPAIKAKYEERPKKSKKPI 576

Query: 360 FVQASDAAEQKAK 398
               +  A  K+K
Sbjct: 577 TPAKNSKANNKSK 589


>AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB,
           isoform B protein.
          Length = 2693

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +3

Query: 168 RRSFLLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMKRISVLAEKVSAKYKES 335
           +R   LE  +D P       A   + +  L CRYP Q +KR+S L   V A++ ++
Sbjct: 82  QRPASLEDFEDLPNLSAKHPALPSSRLRRLKCRYP-QVVKRLSTLCSDVIARHPQT 136


>AE014296-640|AAF47760.1|  882|Drosophila melanogaster CG11526-PA,
           isoform A protein.
          Length = 882

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
 Frame = +3

Query: 114 IDVDSLRTEHE--SEEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMK 287
           I  +++R E E  SE+  E+  SF+ E     P+ EL+ +  +     F     P   MK
Sbjct: 184 IITETIRDEKEKGSEDYRELADSFVQEINSPLPDGELLAVKLLGMITRFCSGAAPQFPMK 243

Query: 288 RISVLAEKVS 317
           ++ +L  KVS
Sbjct: 244 KVVLLLWKVS 253


>AE014296-639|AAN11560.2|  927|Drosophila melanogaster CG11526-PB,
           isoform B protein.
          Length = 927

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
 Frame = +3

Query: 114 IDVDSLRTEHE--SEEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMK 287
           I  +++R E E  SE+  E+  SF+ E     P+ EL+ +  +     F     P   MK
Sbjct: 229 IITETIRDEKEKGSEDYRELADSFVQEINSPLPDGELLAVKLLGMITRFCSGAAPQFPMK 288

Query: 288 RISVLAEKVS 317
           ++ +L  KVS
Sbjct: 289 KVVLLLWKVS 298


>M32078-4|AAB59192.1| 2077|Drosophila melanogaster sodium channel
           alpha subunit protein.
          Length = 2077

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 144 ESEEQWEVRRSFLLEHKDDFPEAEL 218
           E  +   V RSF L+HKD FP+ +L
Sbjct: 900 EGVQGLSVLRSFRLDHKDRFPDGDL 924


>AE014297-3327|AAF56136.1|  858|Drosophila melanogaster CG4374-PA
           protein.
          Length = 858

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
 Frame = -2

Query: 274 GGYLHPKNSILV*ICASVTNSASGKSSLCSKR-KLRLT----SHCSSDSCSVLNEST 119
           GG L P N +L   CA      S ++    KR +LR++    ++CSS S S  N S+
Sbjct: 759 GGVLPPANGLLANRCAPCPLFGSRRAECTRKRMQLRMSTTDCNNCSSSSSSNCNNSS 815


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,099,812
Number of Sequences: 53049
Number of extensions: 422100
Number of successful extensions: 1360
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1360
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)