Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25e23
         (554 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75546-5|CAA99893.2|  335|Caenorhabditis elegans Hypothetical pr...    68   4e-12
U00065-9|AAA50738.2| 1009|Caenorhabditis elegans Hypothetical pr...    35   0.045
AL023856-6|CAC15864.1|  332|Caenorhabditis elegans Hypothetical ...    33   0.14 
AL023856-2|CAA19567.1|  327|Caenorhabditis elegans Hypothetical ...    30   0.97 
AF016655-1|AAK72055.3|  318|Caenorhabditis elegans Serpentine re...    29   3.0  
Z81142-5|CAB03507.1|  319|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z81116-14|CAB03310.2|  335|Caenorhabditis elegans Hypothetical p...    28   5.2  
Z81100-6|CAB03195.2|  335|Caenorhabditis elegans Hypothetical pr...    28   5.2  
U40946-4|AAA81726.1|  414|Caenorhabditis elegans Hypothetical pr...    27   6.9  
AL117207-6|CAB60396.2|  372|Caenorhabditis elegans Hypothetical ...    27   6.9  
Z80220-3|CAB02306.1|  601|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AL023856-1|CAA19566.1|  327|Caenorhabditis elegans Hypothetical ...    27   9.1  
AF016659-1|AAB66047.3| 1251|Caenorhabditis elegans Hypothetical ...    27   9.1  

>Z75546-5|CAA99893.2|  335|Caenorhabditis elegans Hypothetical
           protein R05D11.6 protein.
          Length = 335

 Score = 68.1 bits (159), Expect = 4e-12
 Identities = 32/96 (33%), Positives = 61/96 (63%)
 Frame = +3

Query: 117 DVDSLRTEHESEEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMKRIS 296
           DV++ +   ES++ WE+R++F+L H DD+P+ +L  L+Q++ N+  LGC Y    M++I 
Sbjct: 6   DVEAEKKLWESDDAWELRKAFMLAHYDDYPKIQLQCLSQLFINVTLLGCEYSQTLMQKIR 65

Query: 297 VLAEKVSAKYKESRKNKLKRTFVQASDAAEQKAKRT 404
            +   ++A  K+  K     ++V+AS A +++A +T
Sbjct: 66  TMGAGIAAN-KDRTKT---GSYVKASAAKKRQAVKT 97


>U00065-9|AAA50738.2| 1009|Caenorhabditis elegans Hypothetical protein
            D1044.6 protein.
          Length = 1009

 Score = 34.7 bits (76), Expect = 0.045
 Identities = 18/51 (35%), Positives = 32/51 (62%)
 Frame = +3

Query: 54   RNRKYIGI*KK*TLHTMKPSIDVDSLRTEHESEEQWEVRRSFLLEHKDDFP 206
            R+RKYIG+ +K    +++ ++DV  L T+++ + QW +    L+ H  DFP
Sbjct: 922  RHRKYIGLVQKERKFSLEQALDVCKL-TDYD-KRQWTILHDQLVTHFKDFP 970


>AL023856-6|CAC15864.1|  332|Caenorhabditis elegans Hypothetical
           protein Y94A7B.9 protein.
          Length = 332

 Score = 33.1 bits (72), Expect = 0.14
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = -3

Query: 357 FVSTYSFCSPCTWRTLSRPIPKCVSLFEVDICILKIRYWYRFAPVSLIQLLENRLCVLKG 178
           F+  Y FCSP  +      I + V    +D+ ++     ++  PVS+I + ENR  VL G
Sbjct: 66  FIQPY-FCSPA-FAGFPLGIVQWVKGIPMDVLVVCATAIFKVVPVSIISMFENRYFVLFG 123

Query: 177 N 175
           N
Sbjct: 124 N 124


>AL023856-2|CAA19567.1|  327|Caenorhabditis elegans Hypothetical
           protein Y94A7B.5 protein.
          Length = 327

 Score = 30.3 bits (65), Expect = 0.97
 Identities = 17/52 (32%), Positives = 29/52 (55%)
 Frame = -3

Query: 339 FCSPCTWRTLSRPIPKCVSLFEVDICILKIRYWYRFAPVSLIQLLENRLCVL 184
           FC+P T+  LS  + K V +   ++ +L I   +   P+S+I + ENR  +L
Sbjct: 71  FCTP-TFSGLSLGVLKWVGI-PTEVLVLVISTIFMLVPISIILMFENRYFIL 120


>AF016655-1|AAK72055.3|  318|Caenorhabditis elegans Serpentine
           receptor, class h protein297 protein.
          Length = 318

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 270 DICILKIRYWYRFAPVSLIQLLENRLCVL 184
           DI  L IR  Y   P+S+I + ENR  +L
Sbjct: 90  DISELTIRTLYMLVPISIITMFENRYYIL 118


>Z81142-5|CAB03507.1|  319|Caenorhabditis elegans Hypothetical
           protein ZK1037.8 protein.
          Length = 319

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -3

Query: 270 DICILKIRYWYRFAPVSLIQLLENRLCVLKG 178
           D  IL IR  +   PVS+I + ENR  VL G
Sbjct: 90  DAQILAIRAVFMLVPVSIIFMFENRYFVLFG 120


>Z81116-14|CAB03310.2|  335|Caenorhabditis elegans Hypothetical
           protein K08G2.8 protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
 Frame = -3

Query: 378 HRWLARKFVSTYSFCSP--CTWRTLSRPIPKCVSLFEV--DICILKIRYWYRFAPVSLIQ 211
           H W A   +S      P  CT    + P+   +SL  V  D+ +L I   +   PVS+I 
Sbjct: 56  HFWSAALDLSISFLAQPFFCTPTMAAFPLG-VLSLIGVPNDLLMLSIYTIFMLVPVSIIS 114

Query: 210 LLENRLCVL 184
           + ENR  VL
Sbjct: 115 MFENRYFVL 123


>Z81100-6|CAB03195.2|  335|Caenorhabditis elegans Hypothetical
           protein K08G2.8 protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
 Frame = -3

Query: 378 HRWLARKFVSTYSFCSP--CTWRTLSRPIPKCVSLFEV--DICILKIRYWYRFAPVSLIQ 211
           H W A   +S      P  CT    + P+   +SL  V  D+ +L I   +   PVS+I 
Sbjct: 56  HFWSAALDLSISFLAQPFFCTPTMAAFPLG-VLSLIGVPNDLLMLSIYTIFMLVPVSIIS 114

Query: 210 LLENRLCVL 184
           + ENR  VL
Sbjct: 115 MFENRYFVL 123


>U40946-4|AAA81726.1|  414|Caenorhabditis elegans Hypothetical
           protein W05H9.1 protein.
          Length = 414

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 321 KYKESRKNKLKRTFVQASDAAEQKA 395
           KY+E  + KL  T  + SDA +Q+A
Sbjct: 56  KYREETQKKLNETLSKVSDAVKQRA 80


>AL117207-6|CAB60396.2|  372|Caenorhabditis elegans Hypothetical
           protein Y60A3A.8 protein.
          Length = 372

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 153 EQWEVRRSFLLEHKDDFPEAELVTLAQIYTNIEFLG 260
           EQW+  RS LLEH  D    EL    +I  ++   G
Sbjct: 229 EQWKGARSVLLEHLSDVKIEELKDFNEIQMHVRDSG 264


>Z80220-3|CAB02306.1|  601|Caenorhabditis elegans Hypothetical
           protein T08G11.3 protein.
          Length = 601

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
 Frame = +3

Query: 174 SFLLE-HKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMKRISVLAEKVSAKYKESRKNKL 350
           SFL + HK D  +A+L     I  N    G +YP +   R      K   K++E +    
Sbjct: 54  SFLNKRHKCDHVDADLGFGNGIEENQTEYGMQYPAKQAPRYLKTCNKKQLKFRERQAKSR 113

Query: 351 KRTFVQASD 377
             TF+   D
Sbjct: 114 NATFLSDGD 122


>AL023856-1|CAA19566.1|  327|Caenorhabditis elegans Hypothetical
           protein Y94A7B.4 protein.
          Length = 327

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -3

Query: 270 DICILKIRYWYRFAPVSLIQLLENRLCVL 184
           D+ +L ++  +   PVS+I + ENR  +L
Sbjct: 88  DVLVLVLKTVFMLVPVSIISMFENRYFIL 116


>AF016659-1|AAB66047.3| 1251|Caenorhabditis elegans Hypothetical
            protein F40E12.2 protein.
          Length = 1251

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +3

Query: 150  EEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNIEF 254
            +++WE R   +L+H D   E +  ++  +YT ++F
Sbjct: 1103 KKKWEQRSCIILKHSDSKIEKKWQSMHAMYTLVDF 1137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,229,553
Number of Sequences: 27780
Number of extensions: 233008
Number of successful extensions: 625
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)