Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25e19
(553 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY314779-1|AAQ84886.1| 454|Caenorhabditis elegans secretin rece... 69 2e-12
AL031620-2|CAA20927.2| 454|Caenorhabditis elegans Hypothetical ... 69 2e-12
U21309-6|AAT92086.1| 541|Caenorhabditis elegans Hypothetical pr... 68 4e-12
U21309-5|AAT92085.1| 536|Caenorhabditis elegans Hypothetical pr... 68 4e-12
U21309-4|AAN73883.1| 546|Caenorhabditis elegans Hypothetical pr... 68 4e-12
AY314778-1|AAQ84885.1| 546|Caenorhabditis elegans calcitonin re... 68 4e-12
AY314777-1|AAQ84884.1| 541|Caenorhabditis elegans calcitonin re... 68 4e-12
AY314776-1|AAQ84883.1| 536|Caenorhabditis elegans calcitonin re... 68 4e-12
Z11126-7|CAO82061.1| 522|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z11126-6|CAA77471.2| 480|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U41532-5|AAF99906.2| 111|Caenorhabditis elegans Hypothetical pr... 27 9.0
>AY314779-1|AAQ84886.1| 454|Caenorhabditis elegans secretin
receptor-like proteinSEB-3 protein.
Length = 454
Score = 69.3 bits (162), Expect = 2e-12
Identities = 33/98 (33%), Positives = 62/98 (63%)
Frame = +2
Query: 2 NLFFLVRIMWVLITKLRSANTLETEQYRKATKALLVLIPLLGITNLLVLCGPSDDSWFAY 181
NL FL+ I+ +L+ KLR+ N+ E+++ + KA L+L+PLLGI+N+ + P S
Sbjct: 294 NLIFLLMIVVILVQKLRTENSAESKKIWRTIKATLLLVPLLGISNIPLFYEPEHPS---S 350
Query: 182 SFDYARALMLSTQGFTVALFYCFMNTEVRHAIRYHVER 295
+ A++ +QG +A+ YCF+N+E++ A++ + +
Sbjct: 351 VYMLGSAILQHSQGIFIAVLYCFLNSEIQGALKRQLSK 388
>AL031620-2|CAA20927.2| 454|Caenorhabditis elegans Hypothetical
protein C18B12.2 protein.
Length = 454
Score = 69.3 bits (162), Expect = 2e-12
Identities = 33/98 (33%), Positives = 62/98 (63%)
Frame = +2
Query: 2 NLFFLVRIMWVLITKLRSANTLETEQYRKATKALLVLIPLLGITNLLVLCGPSDDSWFAY 181
NL FL+ I+ +L+ KLR+ N+ E+++ + KA L+L+PLLGI+N+ + P S
Sbjct: 294 NLIFLLMIVVILVQKLRTENSAESKKIWRTIKATLLLVPLLGISNIPLFYEPEHPS---S 350
Query: 182 SFDYARALMLSTQGFTVALFYCFMNTEVRHAIRYHVER 295
+ A++ +QG +A+ YCF+N+E++ A++ + +
Sbjct: 351 VYMLGSAILQHSQGIFIAVLYCFLNSEIQGALKRQLSK 388
>U21309-6|AAT92086.1| 541|Caenorhabditis elegans Hypothetical
protein C13B9.4c protein.
Length = 541
Score = 68.1 bits (159), Expect = 4e-12
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Frame = +2
Query: 2 NLFFLVRIMWVLITKLRSANTLETEQYRKATKALLVLIPLLGITNLL--VLCGPSDDSWF 175
NLFF+ ++ VL +K+R +N +K+ KA ++L+PLLG+ N++ + P+ D+
Sbjct: 346 NLFFICNVIRVLYSKVRESNNTSEAGLKKSVKAAMMLLPLLGVPNIMQTIPFAPTRDNIM 405
Query: 176 AYS-FDYARALMLSTQGFTVALFYCFMNTEVRHAIRYHVERWK 301
++ + Y + QG VA YCF N EV H ++ R++
Sbjct: 406 VFAVWTYTASFTYMYQGLMVASIYCFTNKEVNHVLKTFYARYR 448
>U21309-5|AAT92085.1| 536|Caenorhabditis elegans Hypothetical
protein C13B9.4b protein.
Length = 536
Score = 68.1 bits (159), Expect = 4e-12
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Frame = +2
Query: 2 NLFFLVRIMWVLITKLRSANTLETEQYRKATKALLVLIPLLGITNLL--VLCGPSDDSWF 175
NLFF+ ++ VL +K+R +N +K+ KA ++L+PLLG+ N++ + P+ D+
Sbjct: 336 NLFFICNVIRVLYSKVRESNNTSEAGLKKSVKAAMMLLPLLGVPNIMQTIPFAPTRDNIM 395
Query: 176 AYS-FDYARALMLSTQGFTVALFYCFMNTEVRHAIRYHVERWK 301
++ + Y + QG VA YCF N EV H ++ R++
Sbjct: 396 VFAVWTYTASFTYMYQGLMVASIYCFTNKEVNHVLKTFYARYR 438
>U21309-4|AAN73883.1| 546|Caenorhabditis elegans Hypothetical
protein C13B9.4a protein.
Length = 546
Score = 68.1 bits (159), Expect = 4e-12
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Frame = +2
Query: 2 NLFFLVRIMWVLITKLRSANTLETEQYRKATKALLVLIPLLGITNLL--VLCGPSDDSWF 175
NLFF+ ++ VL +K+R +N +K+ KA ++L+PLLG+ N++ + P+ D+
Sbjct: 346 NLFFICNVIRVLYSKVRESNNTSEAGLKKSVKAAMMLLPLLGVPNIMQTIPFAPTRDNIM 405
Query: 176 AYS-FDYARALMLSTQGFTVALFYCFMNTEVRHAIRYHVERWK 301
++ + Y + QG VA YCF N EV H ++ R++
Sbjct: 406 VFAVWTYTASFTYMYQGLMVASIYCFTNKEVNHVLKTFYARYR 448
>AY314778-1|AAQ84885.1| 546|Caenorhabditis elegans calcitonin
receptor-like proteinSEB-1C protein.
Length = 546
Score = 68.1 bits (159), Expect = 4e-12
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Frame = +2
Query: 2 NLFFLVRIMWVLITKLRSANTLETEQYRKATKALLVLIPLLGITNLL--VLCGPSDDSWF 175
NLFF+ ++ VL +K+R +N +K+ KA ++L+PLLG+ N++ + P+ D+
Sbjct: 346 NLFFICNVIRVLYSKVRESNNTSEAGLKKSVKAAMMLLPLLGVPNIMQTIPFAPTRDNIM 405
Query: 176 AYS-FDYARALMLSTQGFTVALFYCFMNTEVRHAIRYHVERWK 301
++ + Y + QG VA YCF N EV H ++ R++
Sbjct: 406 VFAVWTYTASFTYMYQGLMVASIYCFTNKEVNHVLKTFYARYR 448
>AY314777-1|AAQ84884.1| 541|Caenorhabditis elegans calcitonin
receptor-like proteinSEB-1B protein.
Length = 541
Score = 68.1 bits (159), Expect = 4e-12
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Frame = +2
Query: 2 NLFFLVRIMWVLITKLRSANTLETEQYRKATKALLVLIPLLGITNLL--VLCGPSDDSWF 175
NLFF+ ++ VL +K+R +N +K+ KA ++L+PLLG+ N++ + P+ D+
Sbjct: 346 NLFFICNVIRVLYSKVRESNNTSEAGLKKSVKAAMMLLPLLGVPNIMQTIPFAPTRDNIM 405
Query: 176 AYS-FDYARALMLSTQGFTVALFYCFMNTEVRHAIRYHVERWK 301
++ + Y + QG VA YCF N EV H ++ R++
Sbjct: 406 VFAVWTYTASFTYMYQGLMVASIYCFTNKEVNHVLKTFYARYR 448
>AY314776-1|AAQ84883.1| 536|Caenorhabditis elegans calcitonin
receptor-like proteinSEB-1A protein.
Length = 536
Score = 68.1 bits (159), Expect = 4e-12
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Frame = +2
Query: 2 NLFFLVRIMWVLITKLRSANTLETEQYRKATKALLVLIPLLGITNLL--VLCGPSDDSWF 175
NLFF+ ++ VL +K+R +N +K+ KA ++L+PLLG+ N++ + P+ D+
Sbjct: 336 NLFFICNVIRVLYSKVRESNNTSEAGLKKSVKAAMMLLPLLGVPNIMQTIPFAPTRDNIM 395
Query: 176 AYS-FDYARALMLSTQGFTVALFYCFMNTEVRHAIRYHVERWK 301
++ + Y + QG VA YCF N EV H ++ R++
Sbjct: 396 VFAVWTYTASFTYMYQGLMVASIYCFTNKEVNHVLKTFYARYR 438
>Z11126-7|CAO82061.1| 522|Caenorhabditis elegans Hypothetical
protein ZK643.3b protein.
Length = 522
Score = 47.6 bits (108), Expect = 6e-06
Identities = 30/88 (34%), Positives = 46/88 (52%)
Frame = +2
Query: 2 NLFFLVRIMWVLITKLRSANTLETEQYRKATKALLVLIPLLGITNLLVLCGPSDDSWFAY 181
NL L I+++L+ KLR LE QYRKA + L+LIP+ G+ LL + S ++++
Sbjct: 395 NLLLLGLIVYILVKKLRCDPHLERIQYRKAVRGALMLIPVFGVQQLLTIYRFS-NTYYQV 453
Query: 182 SFDYARALMLSTQGFTVALFYCFMNTEV 265
+ L QG V+ C+ N V
Sbjct: 454 TDQSLNGL----QGMFVSFIVCYTNRSV 477
>Z11126-6|CAA77471.2| 480|Caenorhabditis elegans Hypothetical
protein ZK643.3a protein.
Length = 480
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +2
Query: 2 NLFFLVRIMWVLITKLRSANTLETEQYRKATKALLVLIPLLGITNLLVL 148
NL L I+++L+ KLR LE QYRKA + L+LIP+ G+ LL +
Sbjct: 395 NLLLLGLIVYILVKKLRCDPHLERIQYRKAVRGALMLIPVFGVQQLLTI 443
>U41532-5|AAF99906.2| 111|Caenorhabditis elegans Hypothetical
protein F11D5.6 protein.
Length = 111
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 298 EDWQKYRRREKEGSFIL*GLVS*IQNGEY 384
EDW Y+ RE+ S + ++NG+Y
Sbjct: 37 EDWMDYKNRERRASTATTETIQSLKNGKY 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,707,599
Number of Sequences: 27780
Number of extensions: 222370
Number of successful extensions: 635
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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