Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25e13
         (675 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070532-1|AAL48003.1|  531|Drosophila melanogaster GM14334p pro...   144   1e-34
AF113612-1|AAD21582.1|  531|Drosophila melanogaster aspartyl tRN...   144   1e-34
AE013599-1606|AAF58445.1|  531|Drosophila melanogaster CG3821-PA...   144   1e-34
AY051856-1|AAK93280.1|  874|Drosophila melanogaster LD35413p pro...    29   4.4  
AE014297-1406|AAF54719.2|  874|Drosophila melanogaster CG31211-P...    29   4.4  
AE014297-1405|AAO41546.1|  893|Drosophila melanogaster CG31211-P...    29   4.4  
AE014297-385|ABI31142.1| 1689|Drosophila melanogaster CG34113-PO...    29   4.4  
X62590-1|CAA44475.1|  879|Drosophila melanogaster standard param...    29   7.7  
X58722-1|CAA41557.1|  878|Drosophila melanogaster paramyosin pro...    29   7.7  
AY069132-1|AAL39277.1|  702|Drosophila melanogaster GH14085p pro...    29   7.7  
AE014296-1514|AAN11994.1|  879|Drosophila melanogaster CG5939-PB...    29   7.7  
AE014296-1513|AAF50370.1|  879|Drosophila melanogaster CG5939-PA...    29   7.7  

>AY070532-1|AAL48003.1|  531|Drosophila melanogaster GM14334p
           protein.
          Length = 531

 Score =  144 bits (349), Expect = 1e-34
 Identities = 72/143 (50%), Positives = 99/143 (69%)
 Frame = +1

Query: 247 ESEPDFSEGLYGNMKMIQSSGEHRDRVYTDVENLSIKMDGQTVWVRARLQTSRAKGKQCF 426
           +S  D + G YG  +MIQS  +  +R +  V  LS ++    VWVR R+ TSRAKGKQCF
Sbjct: 47  DSAEDHAAGRYGLSEMIQSKDKRSERNFVPVSELSGQVGKGLVWVRGRVHTSRAKGKQCF 106

Query: 427 AVLRQTSSTVQLLVSVNEQRKISKQMVKFTGNITRESIVDVEASVVRTAAPVESCTIKDV 606
            +LRQ SSTVQ +++V +   ISKQMVKF GNI +ESI+D++A  V  ++ +ESCT + +
Sbjct: 107 LILRQQSSTVQCILAVGDV--ISKQMVKFAGNIPKESIIDIQAKPVAVSSKIESCTEQSL 164

Query: 607 ELVAHQIWTVSSARSQLPLQIED 675
           EL   QI+ +S A++QLPLQIED
Sbjct: 165 ELSVEQIFVISQAKAQLPLQIED 187


>AF113612-1|AAD21582.1|  531|Drosophila melanogaster aspartyl tRNA
           synthetase protein.
          Length = 531

 Score =  144 bits (349), Expect = 1e-34
 Identities = 72/143 (50%), Positives = 99/143 (69%)
 Frame = +1

Query: 247 ESEPDFSEGLYGNMKMIQSSGEHRDRVYTDVENLSIKMDGQTVWVRARLQTSRAKGKQCF 426
           +S  D + G YG  +MIQS  +  +R +  V  LS ++    VWVR R+ TSRAKGKQCF
Sbjct: 47  DSAEDHAAGRYGLSEMIQSKDKRSERNFVPVSELSGQVGKGLVWVRGRVHTSRAKGKQCF 106

Query: 427 AVLRQTSSTVQLLVSVNEQRKISKQMVKFTGNITRESIVDVEASVVRTAAPVESCTIKDV 606
            +LRQ SSTVQ +++V +   ISKQMVKF GNI +ESI+D++A  V  ++ +ESCT + +
Sbjct: 107 LILRQQSSTVQCILAVGDV--ISKQMVKFAGNIPKESIIDIQAKPVAVSSKIESCTEQSL 164

Query: 607 ELVAHQIWTVSSARSQLPLQIED 675
           EL   QI+ +S A++QLPLQIED
Sbjct: 165 ELSVEQIFVISQAKAQLPLQIED 187


>AE013599-1606|AAF58445.1|  531|Drosophila melanogaster CG3821-PA
           protein.
          Length = 531

 Score =  144 bits (349), Expect = 1e-34
 Identities = 72/143 (50%), Positives = 99/143 (69%)
 Frame = +1

Query: 247 ESEPDFSEGLYGNMKMIQSSGEHRDRVYTDVENLSIKMDGQTVWVRARLQTSRAKGKQCF 426
           +S  D + G YG  +MIQS  +  +R +  V  LS ++    VWVR R+ TSRAKGKQCF
Sbjct: 47  DSAEDHAAGRYGLSEMIQSKDKRSERNFVPVSELSGQVGKGLVWVRGRVHTSRAKGKQCF 106

Query: 427 AVLRQTSSTVQLLVSVNEQRKISKQMVKFTGNITRESIVDVEASVVRTAAPVESCTIKDV 606
            +LRQ SSTVQ +++V +   ISKQMVKF GNI +ESI+D++A  V  ++ +ESCT + +
Sbjct: 107 LILRQQSSTVQCILAVGDV--ISKQMVKFAGNIPKESIIDIQAKPVAVSSKIESCTEQSL 164

Query: 607 ELVAHQIWTVSSARSQLPLQIED 675
           EL   QI+ +S A++QLPLQIED
Sbjct: 165 ELSVEQIFVISQAKAQLPLQIED 187


>AY051856-1|AAK93280.1|  874|Drosophila melanogaster LD35413p
           protein.
          Length = 874

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 22/68 (32%), Positives = 29/68 (42%)
 Frame = +3

Query: 471 R*RATEDQQTDGQIHRQHHERVDSRRGGFGREDGRPSRIVHN*GRGTGGSSDMDGIERQI 650
           R RA E ++   + HRQH     S+  G   +  R  R   + G   GGSS      RQ 
Sbjct: 762 RERARERERDRDRSHRQHRS---SQLSGSHHQKQRRHRESSHSGEDAGGSSSYHRSSRQS 818

Query: 651 PASSADRG 674
            + S D G
Sbjct: 819 SSRSHDHG 826


>AE014297-1406|AAF54719.2|  874|Drosophila melanogaster CG31211-PA,
           isoform A protein.
          Length = 874

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 22/68 (32%), Positives = 29/68 (42%)
 Frame = +3

Query: 471 R*RATEDQQTDGQIHRQHHERVDSRRGGFGREDGRPSRIVHN*GRGTGGSSDMDGIERQI 650
           R RA E ++   + HRQH     S+  G   +  R  R   + G   GGSS      RQ 
Sbjct: 762 RERARERERDRDRSHRQHRS---SQLSGSHHQKQRRHRESSHSGEDAGGSSSYHRSSRQS 818

Query: 651 PASSADRG 674
            + S D G
Sbjct: 819 SSRSHDHG 826


>AE014297-1405|AAO41546.1|  893|Drosophila melanogaster CG31211-PB,
           isoform B protein.
          Length = 893

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 22/68 (32%), Positives = 29/68 (42%)
 Frame = +3

Query: 471 R*RATEDQQTDGQIHRQHHERVDSRRGGFGREDGRPSRIVHN*GRGTGGSSDMDGIERQI 650
           R RA E ++   + HRQH     S+  G   +  R  R   + G   GGSS      RQ 
Sbjct: 781 RERARERERDRDRSHRQHRS---SQLSGSHHQKQRRHRESSHSGEDAGGSSSYHRSSRQS 837

Query: 651 PASSADRG 674
            + S D G
Sbjct: 838 SSRSHDHG 845


>AE014297-385|ABI31142.1| 1689|Drosophila melanogaster CG34113-PO,
           isoform O protein.
          Length = 1689

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 495 QTDGQIHRQHHERVDSRRGGFGREDGRPSR 584
           Q   Q+ +QHH+   ++ GG  + DG P++
Sbjct: 724 QQQQQLQQQHHQATATKSGGDNKPDGSPAK 753


>X62590-1|CAA44475.1|  879|Drosophila melanogaster standard
           paramyosin protein.
          Length = 879

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
 Frame = +1

Query: 382 RARLQTSRAKGK-QCFAVLRQTSS-TVQLLVSVNEQRKISKQMVKFTGNITRESIVDVEA 555
           +AR +  +AK + + + +L Q  S   + +VS     K+   + +    I   +   ++ 
Sbjct: 143 KARAEKDKAKFQTEVYELLSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDI 202

Query: 556 SVVRTAAPVESCTI-KDVELVAHQIWTVSSARSQLPLQIED 675
           S  R+    E+  + KDV+ +  Q+ TVS ++SQ+  Q+ED
Sbjct: 203 SSHRSRLSQENIELTKDVQDLKVQLDTVSFSKSQVISQLED 243


>X58722-1|CAA41557.1|  878|Drosophila melanogaster paramyosin
           protein.
          Length = 878

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
 Frame = +1

Query: 382 RARLQTSRAKGK-QCFAVLRQTSS-TVQLLVSVNEQRKISKQMVKFTGNITRESIVDVEA 555
           +AR +  +AK + + + +L Q  S   + +VS     K+   + +    I   +   ++ 
Sbjct: 143 KARAEKDKAKFQTEVYELLSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDI 202

Query: 556 SVVRTAAPVESCTI-KDVELVAHQIWTVSSARSQLPLQIED 675
           S  R+    E+  + KDV+ +  Q+ TVS ++SQ+  Q+ED
Sbjct: 203 SSHRSRLSQENIELTKDVQDLKVQLDTVSFSKSQVISQLED 243


>AY069132-1|AAL39277.1|  702|Drosophila melanogaster GH14085p
           protein.
          Length = 702

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
 Frame = +1

Query: 382 RARLQTSRAKGK-QCFAVLRQTSS-TVQLLVSVNEQRKISKQMVKFTGNITRESIVDVEA 555
           +AR +  +AK + + + +L Q  S   + +VS     K+   + +    I   +   ++ 
Sbjct: 143 KARAEKDKAKFQTEVYELLSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDI 202

Query: 556 SVVRTAAPVESCTI-KDVELVAHQIWTVSSARSQLPLQIED 675
           S  R+    E+  + KDV+ +  Q+ TVS ++SQ+  Q+ED
Sbjct: 203 SSHRSRLSQENIELTKDVQDLKVQLDTVSFSKSQVISQLED 243


>AE014296-1514|AAN11994.1|  879|Drosophila melanogaster CG5939-PB,
           isoform B protein.
          Length = 879

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
 Frame = +1

Query: 382 RARLQTSRAKGK-QCFAVLRQTSS-TVQLLVSVNEQRKISKQMVKFTGNITRESIVDVEA 555
           +AR +  +AK + + + +L Q  S   + +VS     K+   + +    I   +   ++ 
Sbjct: 143 KARAEKDKAKFQTEVYELLSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDI 202

Query: 556 SVVRTAAPVESCTI-KDVELVAHQIWTVSSARSQLPLQIED 675
           S  R+    E+  + KDV+ +  Q+ TVS ++SQ+  Q+ED
Sbjct: 203 SSHRSRLSQENIELTKDVQDLKVQLDTVSFSKSQVISQLED 243


>AE014296-1513|AAF50370.1|  879|Drosophila melanogaster CG5939-PA,
           isoform A protein.
          Length = 879

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
 Frame = +1

Query: 382 RARLQTSRAKGK-QCFAVLRQTSS-TVQLLVSVNEQRKISKQMVKFTGNITRESIVDVEA 555
           +AR +  +AK + + + +L Q  S   + +VS     K+   + +    I   +   ++ 
Sbjct: 143 KARAEKDKAKFQTEVYELLSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDI 202

Query: 556 SVVRTAAPVESCTI-KDVELVAHQIWTVSSARSQLPLQIED 675
           S  R+    E+  + KDV+ +  Q+ TVS ++SQ+  Q+ED
Sbjct: 203 SSHRSRLSQENIELTKDVQDLKVQLDTVSFSKSQVISQLED 243


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,042,237
Number of Sequences: 53049
Number of extensions: 472238
Number of successful extensions: 1415
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1411
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)