Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25e13
(675 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z19152-1|CAA79536.1| 531|Caenorhabditis elegans Hypothetical pr... 127 6e-30
AF077544-2|AAK39243.2| 644|Caenorhabditis elegans Hypothetical ... 30 1.7
U58756-8|AAY44005.1| 183|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical... 29 3.0
AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical ... 29 3.0
Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical pr... 27 9.2
U23515-15|AAK21452.1| 928|Caenorhabditis elegans Kinesin-like p... 27 9.2
AB023497-1|BAA88682.1| 928|Caenorhabditis elegans kinesin like ... 27 9.2
>Z19152-1|CAA79536.1| 531|Caenorhabditis elegans Hypothetical
protein B0464.1 protein.
Length = 531
Score = 127 bits (307), Expect = 6e-30
Identities = 65/141 (46%), Positives = 97/141 (68%)
Frame = +1
Query: 253 EPDFSEGLYGNMKMIQSSGEHRDRVYTDVENLSIKMDGQTVWVRARLQTSRAKGKQCFAV 432
+ D S+ YG+ ++ S E + + V+ +++ + VWVR R+ T+R+KGK CF V
Sbjct: 45 QEDASKDFYGSYGLVNSK-EKKVLNFLKVKEINVSNATKDVWVRGRIHTTRSKGKNCFLV 103
Query: 433 LRQTSSTVQLLVSVNEQRKISKQMVKFTGNITRESIVDVEASVVRTAAPVESCTIKDVEL 612
LRQ TVQ+ + +NE KISKQM+KF +I++ESIVDV A++ + P+ESCT KDVEL
Sbjct: 104 LRQGVYTVQVAMFMNE--KISKQMLKFVSSISKESIVDVYATINKVDNPIESCTQKDVEL 161
Query: 613 VAHQIWTVSSARSQLPLQIED 675
+A Q++ VS++ +LPLQIED
Sbjct: 162 LAQQVFVVSTSAPKLPLQIED 182
>AF077544-2|AAK39243.2| 644|Caenorhabditis elegans Hypothetical
protein H22K11.2 protein.
Length = 644
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/20 (60%), Positives = 15/20 (75%), Gaps = 3/20 (15%)
Frame = +2
Query: 611 WWLIR---YGRYRAPDPSFL 661
WWLIR G+YR+ DPSF+
Sbjct: 134 WWLIRNTKIGKYRSSDPSFM 153
>U58756-8|AAY44005.1| 183|Caenorhabditis elegans Hypothetical
protein F58F9.11 protein.
Length = 183
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +1
Query: 361 DGQTVWVRARLQTSRAKGKQCFAVLRQTSSTVQLLVSVNEQRKISKQMVKFT 516
DG T+W+R R S + G C ++++T + + + K + FT
Sbjct: 106 DGDTMWIRTRRCLSESAGCNCTGNNTESTTTCPCRAMTSIESGLEKLSISFT 157
>AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical
protein Y18D10A.13 protein.
Length = 2417
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/54 (22%), Positives = 28/54 (51%)
Frame = +1
Query: 478 EQRKISKQMVKFTGNITRESIVDVEASVVRTAAPVESCTIKDVELVAHQIWTVS 639
EQ+++++ +V+ E+ DVE+ VV++ + + H+IW ++
Sbjct: 799 EQQRLARLLVELHSRRPLEASSDVESIVVQSLTSTDDLVCSEAARTFHRIWVLA 852
>AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical
protein protein.
Length = 2417
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/54 (22%), Positives = 28/54 (51%)
Frame = +1
Query: 478 EQRKISKQMVKFTGNITRESIVDVEASVVRTAAPVESCTIKDVELVAHQIWTVS 639
EQ+++++ +V+ E+ DVE+ VV++ + + H+IW ++
Sbjct: 799 EQQRLARLLVELHSRRPLEASSDVESIVVQSLTSTDDLVCSEAARTFHRIWVLA 852
>Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical
protein Y57G11A.2 protein.
Length = 640
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = -3
Query: 673 PRSAEEA-GIWRSIPSISDEP--PVPRP*LCT 587
P +E G W +PS EP PVPRP L T
Sbjct: 476 PEQTDEVPGPWEPVPSPVPEPEDPVPRPELAT 507
>Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical
protein Y57G11A.2 protein.
Length = 640
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = -3
Query: 673 PRSAEEA-GIWRSIPSISDEP--PVPRP*LCT 587
P +E G W +PS EP PVPRP L T
Sbjct: 476 PEQTDEVPGPWEPVPSPVPEPEDPVPRPELAT 507
>U23515-15|AAK21452.1| 928|Caenorhabditis elegans Kinesin-like
protein protein 6 protein.
Length = 928
Score = 27.5 bits (58), Expect = 9.2
Identities = 21/100 (21%), Positives = 43/100 (43%)
Frame = +1
Query: 337 VENLSIKMDGQTVWVRARLQTSRAKGKQCFAVLRQTSSTVQLLVSVNEQRKISKQMVKFT 516
VENL+ + A+++ + TSS +V + +K SKQ +
Sbjct: 188 VENLTTVPVNSFKEIEAKIEEGTKSRTIAATQMNATSSRAHTIVKITFNQKSSKQAGGTS 247
Query: 517 GNITRESIVDVEASVVRTAAPVESCTIKDVELVAHQIWTV 636
+ ++VD+ S ++AA E +K+ ++ + T+
Sbjct: 248 MKKSEINLVDLAGSERQSAAGTEGDRLKEGIVINQSLTTL 287
>AB023497-1|BAA88682.1| 928|Caenorhabditis elegans kinesin like
protein KLP-6 protein.
Length = 928
Score = 27.5 bits (58), Expect = 9.2
Identities = 21/100 (21%), Positives = 43/100 (43%)
Frame = +1
Query: 337 VENLSIKMDGQTVWVRARLQTSRAKGKQCFAVLRQTSSTVQLLVSVNEQRKISKQMVKFT 516
VENL+ + A+++ + TSS +V + +K SKQ +
Sbjct: 188 VENLTTVPVNSFKEIEAKIEEGTKSRTIAATQMNATSSRAHTIVKITFNQKSSKQAGGTS 247
Query: 517 GNITRESIVDVEASVVRTAAPVESCTIKDVELVAHQIWTV 636
+ ++VD+ S ++AA E +K+ ++ + T+
Sbjct: 248 MKKSEINLVDLAGSERQSAAGTEGDRLKEGIVINQSLTTL 287
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,251,671
Number of Sequences: 27780
Number of extensions: 235894
Number of successful extensions: 687
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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