Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25e08
         (115 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0073 - 17899175-17899756                                         25   6.5  
06_03_0543 + 21967787-21970261                                         25   8.6  

>01_05_0073 - 17899175-17899756
          Length = 193

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 87  LEGLCIVGLXVHDARRTRAMSW 22
           L G  IVG  VHD  ++R + W
Sbjct: 129 LLGKLIVGAPVHDVEQSRRLQW 150


>06_03_0543 + 21967787-21970261
          Length = 824

 Score = 25.0 bits (52), Expect = 8.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 83  KVYVLLAXWFMMREERAQCRGI 18
           +V  +L  WF++R E  Q RG+
Sbjct: 466 EVLFVLLGWFILRREAKQLRGV 487


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,659,783
Number of Sequences: 37544
Number of extensions: 23618
Number of successful extensions: 71
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 14,793,348
effective HSP length: 18
effective length of database: 14,117,556
effective search space used: 268233564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)