Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25d23
         (672 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF087660-1|AAD23566.1|  156|Homo sapiens NADH:ubiquinone oxidore...   108   2e-23
AC002400-1|AAC05814.1|  161|Homo sapiens Acyl carrier protein, M...   108   2e-23
BC058920-1|AAH58920.1|  156|Homo sapiens NADH dehydrogenase (ubi...   105   2e-22
EF036490-1|ABO65076.1|  124|Homo sapiens NADH:ubiquinone oxidore...    78   2e-14
M97806-1|AAB05630.2|  110|Homo sapiens immunoglobulin kappa ligh...    31   3.8  
U51134-1|AAD05036.1|  148|Homo sapiens calcitonin gene-related p...    31   5.0  
BC105808-1|AAI05809.1|  148|Homo sapiens calcitonin gene-related...    31   5.0  
BC040107-1|AAH40107.1|  115|Homo sapiens calcitonin gene-related...    31   5.0  
AF073792-1|AAC25992.1|  148|Homo sapiens CGRP-receptor component...    31   5.0  

>AF087660-1|AAD23566.1|  156|Homo sapiens NADH:ubiquinone
           oxidoreductase SDAP subunit protein.
          Length = 156

 Score =  108 bits (260), Expect = 2e-23
 Identities = 62/139 (44%), Positives = 87/139 (62%), Gaps = 1/139 (0%)
 Frame = +3

Query: 45  SAFGGLLR-RSTTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGV 221
           +AF  L R R       ++  L +   Q +  T++ A+ +  +Q          +YS   
Sbjct: 15  AAFAPLPRVRMLAVARPLSTALCSAGTQTRLGTLQPALVL--AQVPGRVTQLCRQYSD-- 70

Query: 222 QSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEI 401
              L+++ I++RVL V K YDK+   +L+V+SHFM DLGLDSLD VE+IMAMEDEFGFEI
Sbjct: 71  MPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEI 130

Query: 402 PDGDAERLVRPKDIVQYIA 458
           PD DAE+L+ P++IV YIA
Sbjct: 131 PDIDAEKLMCPQEIVDYIA 149


>AC002400-1|AAC05814.1|  161|Homo sapiens Acyl carrier protein,
           Mitochondrial (ACP) (5'partial) protein.
          Length = 161

 Score =  108 bits (260), Expect = 2e-23
 Identities = 62/139 (44%), Positives = 87/139 (62%), Gaps = 1/139 (0%)
 Frame = +3

Query: 45  SAFGGLLR-RSTTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGV 221
           +AF  L R R       ++  L +   Q +  T++ A+ +  +Q          +YS   
Sbjct: 20  AAFAPLPRVRMLAVARPLSTALCSAGTQTRLGTLQPALVL--AQVPGRVTQLCRQYSD-- 75

Query: 222 QSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEI 401
              L+++ I++RVL V K YDK+   +L+V+SHFM DLGLDSLD VE+IMAMEDEFGFEI
Sbjct: 76  MPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEI 135

Query: 402 PDGDAERLVRPKDIVQYIA 458
           PD DAE+L+ P++IV YIA
Sbjct: 136 PDIDAEKLMCPQEIVDYIA 154


>BC058920-1|AAH58920.1|  156|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa protein.
          Length = 156

 Score =  105 bits (251), Expect = 2e-22
 Identities = 61/139 (43%), Positives = 86/139 (61%), Gaps = 1/139 (0%)
 Frame = +3

Query: 45  SAFGGLLR-RSTTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGV 221
           +AF  L R R       ++  L +   Q +  T++ A+ +  +Q          +YS   
Sbjct: 15  AAFAPLPRVRMLAVARPLSTALCSAGTQTRLGTLQPALVL--AQVPGRVTQLCRQYSD-- 70

Query: 222 QSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEI 401
              L+++ I++RVL V K YDK+   +L+V+SHFM DLGLDSLD VE+IMAMEDEFGFEI
Sbjct: 71  MPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEI 130

Query: 402 PDGDAERLVRPKDIVQYIA 458
           P  DAE+L+ P++IV YIA
Sbjct: 131 PYIDAEKLMCPQEIVDYIA 149


>EF036490-1|ABO65076.1|  124|Homo sapiens NADH:ubiquinone
           oxidoreductase SDAP subunit protein.
          Length = 124

 Score = 78.2 bits (184), Expect = 2e-14
 Identities = 47/117 (40%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
 Frame = +3

Query: 45  SAFGGLLR-RSTTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGV 221
           +AF  L R R       ++  L +   Q +  T++ A+ +  +Q          +YS   
Sbjct: 12  AAFAPLPRVRMLAVARPLSTALCSAGTQTRLGTLQPALVL--AQVPGRVTQLCRQYSD-- 67

Query: 222 QSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFG 392
              L+++ I++RVL V K YDK+   +L+V+SHFM DLGLDSLD VE+IMAMEDEFG
Sbjct: 68  MPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFG 124


>M97806-1|AAB05630.2|  110|Homo sapiens immunoglobulin kappa light
           chain variable region protein.
          Length = 110

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
 Frame = +3

Query: 81  YRTSVTCRLST-----VALQQKFSTIKAAVKIYKSQALQNGVPQSHRYS---TGVQSKLS 236
           YR ++TCR S      +A  Q+   I   + IYK+ +LQ+GV  S R+S   +G    L+
Sbjct: 17  YRVTITCRASQSISSWLAWYQQKPGIAPKLLIYKASSLQSGV--SSRFSGSGSGTDFTLT 74

Query: 237 VQEI--EERVLKVCKAYD 284
           +  +  ++     C+ YD
Sbjct: 75  ISSLQPDDFATSYCQQYD 92


>U51134-1|AAD05036.1|  148|Homo sapiens calcitonin gene-related
           peptide receptor component protein protein.
          Length = 148

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 19/60 (31%), Positives = 33/60 (55%)
 Frame = +3

Query: 81  YRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGVQSKLSVQEIEERV 260
           Y +   CR  +  + ++F T   + K+ K++ LQ     +HR  T V+ +L V+E EER+
Sbjct: 52  YISKTPCRHQSPEIVREFLTALKSHKLTKAEKLQL---LNHRPVTAVEIQLMVEESEERL 108


>BC105808-1|AAI05809.1|  148|Homo sapiens calcitonin gene-related
           peptide-receptor component protein protein.
          Length = 148

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 19/60 (31%), Positives = 33/60 (55%)
 Frame = +3

Query: 81  YRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGVQSKLSVQEIEERV 260
           Y +   CR  +  + ++F T   + K+ K++ LQ     +HR  T V+ +L V+E EER+
Sbjct: 52  YISKTPCRHQSPEIVREFLTALKSHKLTKAEKLQL---LNHRPVTAVEIQLMVEESEERL 108


>BC040107-1|AAH40107.1|  115|Homo sapiens calcitonin gene-related
           peptide-receptor component protein protein.
          Length = 115

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 19/60 (31%), Positives = 33/60 (55%)
 Frame = +3

Query: 81  YRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGVQSKLSVQEIEERV 260
           Y +   CR  +  + ++F T   + K+ K++ LQ     +HR  T V+ +L V+E EER+
Sbjct: 19  YISKTPCRHQSPEIVREFLTALKSHKLTKAEKLQL---LNHRPVTAVEIQLMVEESEERL 75


>AF073792-1|AAC25992.1|  148|Homo sapiens CGRP-receptor component
           protein protein.
          Length = 148

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 19/60 (31%), Positives = 33/60 (55%)
 Frame = +3

Query: 81  YRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGVQSKLSVQEIEERV 260
           Y +   CR  +  + ++F T   + K+ K++ LQ     +HR  T V+ +L V+E EER+
Sbjct: 52  YISKTPCRHQSPEIVREFLTALKSHKLTKAEKLQL---LNHRPVTAVEIQLMVEESEERL 108


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,096,476
Number of Sequences: 237096
Number of extensions: 1775407
Number of successful extensions: 3427
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3427
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)