Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25d20
(614 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81497-2|CAB04078.1| 781|Caenorhabditis elegans Hypothetical pr... 186 8e-48
Z47073-1|CAA87371.3| 931|Caenorhabditis elegans Hypothetical pr... 133 8e-32
Z68882-3|CAA93106.2| 568|Caenorhabditis elegans Hypothetical pr... 114 4e-26
Z73906-1|CAA98114.1| 540|Caenorhabditis elegans Hypothetical pr... 79 2e-15
U41272-1|AAA82446.2| 584|Caenorhabditis elegans Hypothetical pr... 78 6e-15
Z68270-2|CAA92567.1| 532|Caenorhabditis elegans Hypothetical pr... 75 4e-14
Z78012-5|CAB01415.1| 590|Caenorhabditis elegans Hypothetical pr... 65 4e-11
U50312-4|AAA92321.1| 542|Caenorhabditis elegans Temporarily ass... 31 0.49
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 29 3.5
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 29 3.5
U97007-1|AAB52291.1| 932|Caenorhabditis elegans Glutamate recep... 28 4.6
AF068711-2|AAC17776.1| 414|Caenorhabditis elegans Hypothetical ... 28 6.1
>Z81497-2|CAB04078.1| 781|Caenorhabditis elegans Hypothetical
protein F10C2.5 protein.
Length = 781
Score = 186 bits (454), Expect = 8e-48
Identities = 86/142 (60%), Positives = 114/142 (80%), Gaps = 2/142 (1%)
Frame = +3
Query: 195 REEVREMFQHAYDSYLRYAYPYDELRPLSCDGVDTWGSYSLTLIDALDTLAIMGNYSEFN 374
RE+V++MF HAY+ YL +A+P DEL+P++C G DTWGS+SL+LIDALDTL +MGN +EF
Sbjct: 43 REKVQKMFYHAYNGYLDHAFPLDELKPITCVGQDTWGSFSLSLIDALDTLLVMGNTTEFR 102
Query: 375 RVVDIVLQKRHFDADINVSVFETNIRIVGGLLSAHLLS--HKTGMKLEPGWPCNGPLLRL 548
R V +VL+K DA++NVSVFETNIR+VGGL+SAH+L+ HK + G+PC+ PLL+L
Sbjct: 103 RAVSLVLEKARDDANVNVSVFETNIRVVGGLISAHMLAGRHKDLVVDWEGYPCDSPLLKL 162
Query: 549 AEDVAQRLIAAFDTTTGMPYGT 614
A +A RL+ AF+T TGMPYGT
Sbjct: 163 AVKMADRLMPAFNTETGMPYGT 184
>Z47073-1|CAA87371.3| 931|Caenorhabditis elegans Hypothetical
protein ZC506.1 protein.
Length = 931
Score = 133 bits (322), Expect = 8e-32
Identities = 68/156 (43%), Positives = 100/156 (64%), Gaps = 13/156 (8%)
Frame = +3
Query: 180 DILKLREEVREMFQHAYDSYLRYAYPYDELRPLSCDGV------------DTWGSYSLTL 323
D KL++E +MF H Y+SY+ YA+P DEL PLSC G D G++S+TL
Sbjct: 25 DKKKLQKEAYDMFMHGYNSYMNYAFPADELMPLSCKGRIRGVTPSRGDVDDVLGNFSVTL 84
Query: 324 IDALDTLAIMGNYSEFNRVVDIVLQKRHFDADINVSVFETNIRIVGGLLSAHLLSHKTGM 503
+D+LDTL +M EF + +D+V++ FD+D VSVFETNIR++GGL+SAH+L+
Sbjct: 85 LDSLDTLVVMNELDEFEKAIDLVIKHVRFDSDHVVSVFETNIRVLGGLISAHVLAELVKE 144
Query: 504 KLEPGWPC-NGPLLRLAEDVAQRLIAAFDTTTGMPY 608
K + LL++A +V RL+ AF+TT+G+P+
Sbjct: 145 KYPNRLTTYDNQLLKMATEVGNRLLPAFNTTSGLPF 180
>Z68882-3|CAA93106.2| 568|Caenorhabditis elegans Hypothetical
protein C47E12.3 protein.
Length = 568
Score = 114 bits (275), Expect = 4e-26
Identities = 63/152 (41%), Positives = 92/152 (60%), Gaps = 16/152 (10%)
Frame = +3
Query: 201 EVREMFQHAYDSYLRYAYPYDELRPLSCDGV-------------DTWGSYSLTLIDALDT 341
+ REMFQ +D+Y+ +A+P DEL P+ C G D G YSL LID LD+
Sbjct: 50 KTREMFQFGWDNYMEHAFPADELDPIHCRGRGHDHDNPDNINVNDVLGDYSLGLIDTLDS 109
Query: 342 LAIMGNYSEFNRVVDIVLQKRHFDADINVSVFETNIRIVGGLLSAHLLSHKTGMKLEPGW 521
L + G+ EF R V++V++ F+ + V VFE+ IR++GGLL+AH+++ + P +
Sbjct: 110 LVVFGDADEFKRAVNLVIKTVSFEKNTTVQVFESTIRVMGGLLAAHMIAADKTNRFGPFY 169
Query: 522 PCN--GPLLRLAEDVAQRLIAAFD-TTTGMPY 608
+ G LL LA D+A RL+ AFD T TG+PY
Sbjct: 170 MSDYGGELLTLAHDLAGRLLPAFDGTATGIPY 201
>Z73906-1|CAA98114.1| 540|Caenorhabditis elegans Hypothetical
protein D2030.1 protein.
Length = 540
Score = 79.4 bits (187), Expect = 2e-15
Identities = 55/139 (39%), Positives = 78/139 (56%), Gaps = 5/139 (3%)
Frame = +3
Query: 204 VREMFQHAYDSYLRYAYPYDELRPLSCDGVDT----WGSYSLTLIDALDTLAIMGNYSEF 371
V++M + A+D Y +YA+ +ELRP S G + +G T+IDA+DTL ++G E+
Sbjct: 93 VKQMIKFAWDGYRKYAWGENELRPNSRSGHSSSIFGYGKTGATIIDAIDTLYLVGLKEEY 152
Query: 372 NRVVDIVLQ-KRHFDADINVSVFETNIRIVGGLLSAHLLSHKTGMKLEPGWPCNGPLLRL 548
D + A ++SVFETNIR GGLLSA L TG K+ L+
Sbjct: 153 KEARDWIADFDFKTSAKGDLSVFETNIRFTGGLLSAFAL---TGDKM---------FLKK 200
Query: 549 AEDVAQRLIAAFDTTTGMP 605
AEDVA L+ AF+T +G+P
Sbjct: 201 AEDVATILLPAFETPSGIP 219
>U41272-1|AAA82446.2| 584|Caenorhabditis elegans Hypothetical
protein T03G11.4 protein.
Length = 584
Score = 77.8 bits (183), Expect = 6e-15
Identities = 47/138 (34%), Positives = 74/138 (53%)
Frame = +3
Query: 195 REEVREMFQHAYDSYLRYAYPYDELRPLSCDGVDTWGSYSLTLIDALDTLAIMGNYSEFN 374
++ V + FQHA+ Y +YA+ +D L+P+S D W LT++D LDT IMG E
Sbjct: 138 QKAVVKAFQHAWIGYKKYAWGHDTLKPVSKSYSD-WFDTGLTIVDGLDTAIIMGLEDEAT 196
Query: 375 RVVDIVLQKRHFDADINVSVFETNIRIVGGLLSAHLLSHKTGMKLEPGWPCNGPLLRLAE 554
+ + F+ D V+ FE IR++GG++SA H TG K+ L +
Sbjct: 197 EATEWIQNTLTFEKDRMVNFFECTIRVLGGMMSAF---HLTGKKM---------FLEKSV 244
Query: 555 DVAQRLIAAFDTTTGMPY 608
D+ RL++AF + + +PY
Sbjct: 245 DLGDRLLSAFKSPSPIPY 262
>Z68270-2|CAA92567.1| 532|Caenorhabditis elegans Hypothetical
protein ZC410.3 protein.
Length = 532
Score = 74.9 bits (176), Expect = 4e-14
Identities = 40/91 (43%), Positives = 59/91 (64%)
Frame = +3
Query: 216 FQHAYDSYLRYAYPYDELRPLSCDGVDTWGSYSLTLIDALDTLAIMGNYSEFNRVVDIVL 395
FQHA+ Y +YA+ +DELRP+S D++G LT+ID+LDT IMG E V+ +
Sbjct: 90 FQHAWSGYKKYAWGHDELRPVSKRFDDSFG-LGLTIIDSLDTAIIMGLEEETRDGVEWIR 148
Query: 396 QKRHFDADINVSVFETNIRIVGGLLSAHLLS 488
+ + +V+VFET IR++GGLLS + L+
Sbjct: 149 ENLNVSPARSVNVFETTIRVLGGLLSGYHLT 179
>Z78012-5|CAB01415.1| 590|Caenorhabditis elegans Hypothetical
protein C52E4.5 protein.
Length = 590
Score = 64.9 bits (151), Expect = 4e-11
Identities = 44/142 (30%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Frame = +3
Query: 195 REEVREMFQHAYDSYLRYAYPYDELRPLS--CDGVDTWGSYSL--TLIDALDTLAIMGNY 362
R++V+EM HA++ Y Y++ +ELRP+S + + +G + T++DA DTL IM
Sbjct: 140 RQKVKEMMIHAWEGYKNYSWGANELRPMSKKPNSQNIFGGSQMPATIVDAADTLFIMDLK 199
Query: 363 SEFNRVVDIVLQKRHF-DADINVSVFETNIRIVGGLLSAHLLSHKTGMKLEPGWPCNGPL 539
++ D + + +SVFET IR +GGLLS + L+ ++
Sbjct: 200 DKYKEARDYIENNFSMAKSTSTLSVFETTIRFLGGLLSLYALTQESF------------Y 247
Query: 540 LRLAEDVAQRLIAAFDTTTGMP 605
+ A +V + L+ AF+T +G+P
Sbjct: 248 IEKAREVGEALLPAFNTPSGIP 269
>U50312-4|AAA92321.1| 542|Caenorhabditis elegans Temporarily
assigned gene nameprotein 38 protein.
Length = 542
Score = 31.5 bits (68), Expect = 0.49
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = -3
Query: 552 QLNEVKDHCMASLVLI--SSQFYVTVNEHSINRQQ 454
QLNEVKD SL ++ S++++ T+ HS+ R +
Sbjct: 76 QLNEVKDELEKSLRIVDRSTEYFTTIPSHSVGRTE 110
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +3
Query: 105 KLTFLISISVLT----CNLILSVRVYKRADILKLREEVREMFQHAYDSYLRYAYP 257
K+++L+SIS+L C + + V K+ D R E RE+ +H D Y +Y P
Sbjct: 4 KISYLLSISILLFFAKCEKVKNKAVEKKDD----RNE-RELAKHLLDDYYQYTRP 53
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +3
Query: 105 KLTFLISISVLT----CNLILSVRVYKRADILKLREEVREMFQHAYDSYLRYAYP 257
K+++L+SIS+L C + + V K+ D R E RE+ +H D Y +Y P
Sbjct: 4 KISYLLSISILLFFAKCEKVKNKAVEKKDD----RNE-RELAKHLLDDYYQYTRP 53
>U97007-1|AAB52291.1| 932|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 5 protein.
Length = 932
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 309 NCPRYQHRRSSMDVIRHKDMHILN 238
N +YQH RS +D I H D+H L+
Sbjct: 350 NSRKYQHGRSLIDNIVHNDLHGLS 373
>AF068711-2|AAC17776.1| 414|Caenorhabditis elegans Hypothetical
protein R09A1.2 protein.
Length = 414
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 81 DKKLIKMVKLTFLISISVLTCNLILSVRVYKRADILKLREE-VREMFQHAYDSYLRYAYP 257
+K+L+++ K + ++++T NL + + IL + +E VR++ +D+Y
Sbjct: 169 EKRLVELAKGNCVDVLNLVTANL--KTIPHSPSTILLISDESVRDIVSILHDTYSTNRLS 226
Query: 258 YDELRPLSCDGVDT 299
Y+E+ LS + V T
Sbjct: 227 YEEILSLSTNTVIT 240
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,591,550
Number of Sequences: 27780
Number of extensions: 247685
Number of successful extensions: 617
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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