Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25d19
(556 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27 pro... 206 3e-53
L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27 pro... 206 3e-53
BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27 p... 206 3e-53
BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27 p... 206 3e-53
BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27 p... 206 3e-53
BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27 p... 206 3e-53
BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27 p... 206 3e-53
AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27 p... 206 3e-53
BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein. 186 6e-47
U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27 pro... 60 4e-09
BX537845-1|CAD97854.1| 1156|Homo sapiens hypothetical protein pr... 30 4.7
BC043404-1|AAH43404.1| 1143|Homo sapiens non-SMC condensin II co... 30 4.7
BC020560-1|AAH20560.1| 935|Homo sapiens NCAPG2 protein protein. 30 4.7
AK023347-1|BAB14534.1| 698|Homo sapiens protein ( Homo sapiens ... 30 4.7
AK022744-1|BAB14219.1| 774|Homo sapiens protein ( Homo sapiens ... 30 4.7
AK000318-1|BAA91081.1| 888|Homo sapiens protein ( Homo sapiens ... 30 4.7
Y18265-1|CAB41400.1| 1324|Homo sapiens zinc finger protein SALL1... 29 8.3
Y18264-1|CAB41399.1| 1324|Homo sapiens zinc finger protein SALL1... 29 8.3
AB065857-1|BAC06075.1| 315|Homo sapiens seven transmembrane hel... 29 8.3
>L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 206 bits (504), Expect = 3e-53
Identities = 97/136 (71%), Positives = 112/136 (82%), Gaps = 2/136 (1%)
Frame = +1
Query: 103 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 282
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 283 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEE 456
KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 457 RYKSGKNKWFFQKLRF 504
RYK+GKNKWFFQKLRF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 206 bits (504), Expect = 3e-53
Identities = 97/136 (71%), Positives = 112/136 (82%), Gaps = 2/136 (1%)
Frame = +1
Query: 103 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 282
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 283 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEE 456
KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 457 RYKSGKNKWFFQKLRF 504
RYK+GKNKWFFQKLRF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 206 bits (504), Expect = 3e-53
Identities = 97/136 (71%), Positives = 112/136 (82%), Gaps = 2/136 (1%)
Frame = +1
Query: 103 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 282
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 283 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEE 456
KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 457 RYKSGKNKWFFQKLRF 504
RYK+GKNKWFFQKLRF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 206 bits (504), Expect = 3e-53
Identities = 97/136 (71%), Positives = 112/136 (82%), Gaps = 2/136 (1%)
Frame = +1
Query: 103 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 282
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 283 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEE 456
KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 457 RYKSGKNKWFFQKLRF 504
RYK+GKNKWFFQKLRF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 206 bits (504), Expect = 3e-53
Identities = 97/136 (71%), Positives = 112/136 (82%), Gaps = 2/136 (1%)
Frame = +1
Query: 103 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 282
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 283 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEE 456
KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 457 RYKSGKNKWFFQKLRF 504
RYK+GKNKWFFQKLRF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 206 bits (504), Expect = 3e-53
Identities = 97/136 (71%), Positives = 112/136 (82%), Gaps = 2/136 (1%)
Frame = +1
Query: 103 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 282
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 283 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEE 456
KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 457 RYKSGKNKWFFQKLRF 504
RYK+GKNKWFFQKLRF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 206 bits (504), Expect = 3e-53
Identities = 97/136 (71%), Positives = 112/136 (82%), Gaps = 2/136 (1%)
Frame = +1
Query: 103 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 282
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 283 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEE 456
KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 457 RYKSGKNKWFFQKLRF 504
RYK+GKNKWFFQKLRF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 206 bits (504), Expect = 3e-53
Identities = 97/136 (71%), Positives = 112/136 (82%), Gaps = 2/136 (1%)
Frame = +1
Query: 103 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 282
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 283 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEE 456
KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 457 RYKSGKNKWFFQKLRF 504
RYK+GKNKWFFQKLRF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein.
Length = 140
Score = 186 bits (452), Expect = 6e-47
Identities = 87/125 (69%), Positives = 102/125 (81%), Gaps = 2/125 (1%)
Frame = +1
Query: 136 LVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPF 315
LVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK F
Sbjct: 16 LVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSF 75
Query: 316 VKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFF 489
VKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEERYK+GKNKWFF
Sbjct: 76 VKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFF 135
Query: 490 QKLRF 504
QKLRF
Sbjct: 136 QKLRF 140
>U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27
protein.
Length = 40
Score = 60.5 bits (140), Expect = 4e-09
Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +1
Query: 391 KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 504
KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 2 KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 40
>BX537845-1|CAD97854.1| 1156|Homo sapiens hypothetical protein
protein.
Length = 1156
Score = 30.3 bits (65), Expect = 4.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 201 LRQAVRACFRRWYRQVPPESAQEDGKE*NPQEVQDK 308
+R + AC +R R+ P + +EDG+E V DK
Sbjct: 574 IRHCLNACIQRAVREPPEDEEEEDGREKENVTVLDK 609
>BC043404-1|AAH43404.1| 1143|Homo sapiens non-SMC condensin II
complex, subunit G2 protein.
Length = 1143
Score = 30.3 bits (65), Expect = 4.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 201 LRQAVRACFRRWYRQVPPESAQEDGKE*NPQEVQDK 308
+R + AC +R R+ P + +EDG+E V DK
Sbjct: 574 IRHCLNACIQRAVREPPEDEEEEDGREKENVTVLDK 609
>BC020560-1|AAH20560.1| 935|Homo sapiens NCAPG2 protein protein.
Length = 935
Score = 30.3 bits (65), Expect = 4.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 201 LRQAVRACFRRWYRQVPPESAQEDGKE*NPQEVQDK 308
+R + AC +R R+ P + +EDG+E V DK
Sbjct: 366 IRHCLNACIQRAVREPPEDEEEEDGREKENVTVLDK 401
>AK023347-1|BAB14534.1| 698|Homo sapiens protein ( Homo sapiens
cDNA FLJ13285 fis, clone OVARC1001129. ).
Length = 698
Score = 30.3 bits (65), Expect = 4.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 201 LRQAVRACFRRWYRQVPPESAQEDGKE*NPQEVQDK 308
+R + AC +R R+ P + +EDG+E V DK
Sbjct: 129 IRHCLNACIQRAVREPPEDEEEEDGREKENVTVLDK 164
>AK022744-1|BAB14219.1| 774|Homo sapiens protein ( Homo sapiens
cDNA FLJ12682 fis, clone NT2RM4002452. ).
Length = 774
Score = 30.3 bits (65), Expect = 4.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 201 LRQAVRACFRRWYRQVPPESAQEDGKE*NPQEVQDK 308
+R + AC +R R+ P + +EDG+E V DK
Sbjct: 205 IRHCLNACIQRAVREPPEDEEEEDGREKENVTVLDK 240
>AK000318-1|BAA91081.1| 888|Homo sapiens protein ( Homo sapiens
cDNA FLJ20311 fis, clone HEP07319. ).
Length = 888
Score = 30.3 bits (65), Expect = 4.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 201 LRQAVRACFRRWYRQVPPESAQEDGKE*NPQEVQDK 308
+R + AC +R R+ P + +EDG+E V DK
Sbjct: 366 IRHCLNACIQRAVREPPEDEEEEDGREKENVTVLDK 401
>Y18265-1|CAB41400.1| 1324|Homo sapiens zinc finger protein SALL1
protein.
Length = 1324
Score = 29.5 bits (63), Expect = 8.3
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -3
Query: 242 SIPATKACPYGLSEVPSS*FLTTIALRPAYRPLKTSTTLPGFIILPILEGFVR 84
+IP + PYG+S P + + +P L TS LP LP L F++
Sbjct: 519 NIPTSTGIPYGMSIPPEKPVTSWLDTKPVLPTLTTSVGLPLPPSLPSLIPFIK 571
>Y18264-1|CAB41399.1| 1324|Homo sapiens zinc finger protein SALL1
protein.
Length = 1324
Score = 29.5 bits (63), Expect = 8.3
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -3
Query: 242 SIPATKACPYGLSEVPSS*FLTTIALRPAYRPLKTSTTLPGFIILPILEGFVR 84
+IP + PYG+S P + + +P L TS LP LP L F++
Sbjct: 519 NIPTSTGIPYGMSIPPEKPVTSWLDTKPVLPTLTTSVGLPLPPSLPSLIPFIK 571
>AB065857-1|BAC06075.1| 315|Homo sapiens seven transmembrane helix
receptor protein.
Length = 315
Score = 29.5 bits (63), Expect = 8.3
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 393 FCAEFFKAEVNCITCWHQVIIVYNLHERLYL 301
FCA + A V IT H + I + LHE +YL
Sbjct: 34 FCATYAVAVVGNITLLHVIRIDHTLHEPMYL 64
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,296,284
Number of Sequences: 237096
Number of extensions: 1626192
Number of successful extensions: 7258
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7243
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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