Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25d18
(676 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 24 1.2
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 24 1.2
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 24 1.2
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 24 1.2
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 2.7
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 6.1
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 6.1
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 6.1
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 6.1
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 6.1
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 8.1
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 99 DPLLHFTISKLIFEQCHILYLTDSHHGNV 13
DPL F I + +EQ I Y+ + G +
Sbjct: 197 DPLCSFAIESISYEQTAITYVWKNDEGTL 225
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 99 DPLLHFTISKLIFEQCHILYLTDSHHGNV 13
DPL F I + +EQ I Y+ + G +
Sbjct: 197 DPLCSFAIESISYEQTAITYVWKNDEGTL 225
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 99 DPLLHFTISKLIFEQCHILYLTDSHHGNV 13
DPL F I + +EQ I Y+ + G +
Sbjct: 248 DPLCSFAIESISYEQTAITYVWKNDEGTL 276
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 99 DPLLHFTISKLIFEQCHILYLTDSHHGNV 13
DPL F I + +EQ I Y+ + G +
Sbjct: 197 DPLCSFAIESISYEQTAITYVWKNDEGTL 225
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 23.0 bits (47), Expect = 2.7
Identities = 7/22 (31%), Positives = 10/22 (45%)
Frame = +2
Query: 200 GKCYCADGFVPNQFHDRCVPCP 265
G C+C G+ + C CP
Sbjct: 245 GGCHCKPGYQADVEKQECTECP 266
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = +1
Query: 580 ITGCTTKVFQDTNNGYSRVSSYSIS 654
I+ + K + NN Y ++ Y+I+
Sbjct: 82 ISSLSNKTIHNNNNNYKKLQYYNIN 106
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = +1
Query: 580 ITGCTTKVFQDTNNGYSRVSSYSIS 654
I+ + K + NN Y ++ Y+I+
Sbjct: 82 ISSLSNKTIHNNNNNYKKLQYYNIN 106
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = +1
Query: 580 ITGCTTKVFQDTNNGYSRVSSYSIS 654
I+ + K + NN Y ++ Y+I+
Sbjct: 82 ISSLSNKTIHNNNNNYKKLQYYNIN 106
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = +1
Query: 580 ITGCTTKVFQDTNNGYSRVSSYSIS 654
I+ + K + NN Y ++ Y+I+
Sbjct: 82 ISSLSNKTIHNNNNNYKKLQYYNIN 106
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = +1
Query: 580 ITGCTTKVFQDTNNGYSRVSSYSIS 654
I+ + K + NN Y ++ Y+I+
Sbjct: 315 ISSLSNKTIHNNNNNYKKLQYYNIN 339
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.4 bits (43), Expect = 8.1
Identities = 6/24 (25%), Positives = 14/24 (58%)
Frame = -1
Query: 667 KSRVQICYSWIHGYIRCWCPGIPW 596
++R+ + WI ++ C+ P + W
Sbjct: 181 RARLLVATVWILSFVICFPPLVGW 204
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,511
Number of Sequences: 438
Number of extensions: 4950
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -