Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25d04
         (500 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73103-6|CAE17680.1|   55|Caenorhabditis elegans Hypothetical pr...    32   0.27 
U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domai...    30   1.1  
AL022593-2|CAN99662.1|   99|Caenorhabditis elegans Hypothetical ...    27   7.6  

>Z73103-6|CAE17680.1|   55|Caenorhabditis elegans Hypothetical
           protein C08F8.9 protein.
          Length = 55

 Score = 31.9 bits (69), Expect = 0.27
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = +2

Query: 152 VKDFYYDPFKWSLVKSVGFFTVGVVIA 232
           V   Y DPF WS+ K V  F VGVV+A
Sbjct: 18  VNTVYNDPFFWSVFKGVIGFGVGVVVA 44


>U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domain
           protein protein 1 protein.
          Length = 709

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +2

Query: 377 NFVLILTDDQDVVLGGM 427
           N +LILTDDQD+ LG M
Sbjct: 36  NVILILTDDQDIELGSM 52


>AL022593-2|CAN99662.1|   99|Caenorhabditis elegans Hypothetical
           protein C49G9.2 protein.
          Length = 99

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 182 WSLVKSVGFFTVGVVIASECT 244
           W  +K  G F +GVV+ S CT
Sbjct: 7   WLQIKQFGIFFLGVVVGSFCT 27


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,189,414
Number of Sequences: 27780
Number of extensions: 187367
Number of successful extensions: 356
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)