SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25d03
         (717 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456928-1|CAG33209.1|  249|Homo sapiens NDUFV2 protein.              261   2e-69
M22538-1|AAA75390.1|  249|Homo sapiens NADH-ubiquinone reductase...   260   3e-69
BC071689-1|AAH71689.1|  249|Homo sapiens NADH dehydrogenase (ubi...   260   3e-69
BC017487-1|AAH17487.1|  249|Homo sapiens NADH dehydrogenase (ubi...   259   8e-69
BC001632-1|AAH01632.1|  249|Homo sapiens NADH dehydrogenase (ubi...   259   8e-69
D88548-1|BAA25988.1|  231|Homo sapiens 24-kDa subunit of complex...   255   1e-67
X95653-1|CAA64955.1|  746|Homo sapiens enhancer of zeste protein.      33   1.0  
U61145-1|AAC51520.1|  746|Homo sapiens enhancer of zeste homolog...    32   1.8  
U52965-1|AAC50591.1|  613|Homo sapiens ENX-1 protein.                  32   1.8  
AC006323-2|AAS02035.1|  664|Homo sapiens unknown protein.              32   1.8  
AB208895-1|BAD92132.1|  376|Homo sapiens Enhancer of zeste homol...    32   1.8  

>CR456928-1|CAG33209.1|  249|Homo sapiens NDUFV2 protein.
          Length = 249

 Score =  261 bits (639), Expect = 2e-69
 Identities = 119/207 (57%), Positives = 159/207 (76%), Gaps = 2/207 (0%)
 Frame = +3

Query: 81  LSSLRTGVQGLWRISSRSIQTTASRQH--DSLFVHRDTPEDNPSIPFEFSQANQKRVEAL 254
           L +   G+   W    R++  TA +     +LFVHRDTPE+NP  PF+F+  N KR+EA+
Sbjct: 7   LRARAAGLTAHWGRHVRNLHKTAMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66

Query: 255 LAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 434
           +  YPEGHK  A++P+LDLAQRQ+G WLPISAM+KVAE+L +P MRVYEVATFYTM+ R+
Sbjct: 67  VKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRK 125

Query: 435 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPM 614
           P+GKYH+QVCTTTPC LR SD+IL AI+++   +VG ++P   F++ EVECLGACVNAPM
Sbjct: 126 PVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGESTPDKLFTLIEVECLGACVNAPM 185

Query: 615 IQVNDDYYEDLSVEDTKEIISQXKEGR 695
           +Q+ND+YYEDL+ +D +EII + K G+
Sbjct: 186 VQINDNYYEDLTAKDIEEIIDELKAGK 212


>M22538-1|AAA75390.1|  249|Homo sapiens NADH-ubiquinone reductase
           protein.
          Length = 249

 Score =  260 bits (638), Expect = 3e-69
 Identities = 119/207 (57%), Positives = 158/207 (76%), Gaps = 2/207 (0%)
 Frame = +3

Query: 81  LSSLRTGVQGLWRISSRSIQTTASRQH--DSLFVHRDTPEDNPSIPFEFSQANQKRVEAL 254
           L +   G+   W    R++  TA +     +LFVHRDTPE+NP  PF+F+  N KR+EA+
Sbjct: 7   LRARAAGLTAHWGRHVRNLHKTAMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66

Query: 255 LAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 434
           +  YPEGHK  A++P+LDLAQRQ+G WLPISAM+KVAE+L +P MRVYEVATFYTM+ R+
Sbjct: 67  VKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRK 125

Query: 435 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPM 614
           P+GKYH+QVCTTTPC LR SD+IL AI+++   +VG  +P   F++ EVECLGACVNAPM
Sbjct: 126 PVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPM 185

Query: 615 IQVNDDYYEDLSVEDTKEIISQXKEGR 695
           +Q+ND+YYEDL+ +D +EII + K G+
Sbjct: 186 VQINDNYYEDLTAKDIEEIIDELKAGK 212


>BC071689-1|AAH71689.1|  249|Homo sapiens NADH dehydrogenase
           (ubiquinone) flavoprotein 2, 24kDa protein.
          Length = 249

 Score =  260 bits (638), Expect = 3e-69
 Identities = 119/207 (57%), Positives = 158/207 (76%), Gaps = 2/207 (0%)
 Frame = +3

Query: 81  LSSLRTGVQGLWRISSRSIQTTASRQH--DSLFVHRDTPEDNPSIPFEFSQANQKRVEAL 254
           L +   G+   W    R++  TA +     +LFVHRDTPE+NP  PF+F+  N KR+EA+
Sbjct: 7   LRARAAGLTAHWGRHVRNLHKTAMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66

Query: 255 LAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 434
           +  YPEGHK  A++P+LDLAQRQ+G WLPISAM+KVAE+L +P MRVYEVATFYTM+ R+
Sbjct: 67  VKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRK 125

Query: 435 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPM 614
           P+GKYH+QVCTTTPC LR SD+IL AI+++   +VG  +P   F++ EVECLGACVNAPM
Sbjct: 126 PVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPM 185

Query: 615 IQVNDDYYEDLSVEDTKEIISQXKEGR 695
           +Q+ND+YYEDL+ +D +EII + K G+
Sbjct: 186 VQINDNYYEDLTAKDIEEIIDELKAGK 212


>BC017487-1|AAH17487.1|  249|Homo sapiens NADH dehydrogenase
           (ubiquinone) flavoprotein 2, 24kDa protein.
          Length = 249

 Score =  259 bits (634), Expect = 8e-69
 Identities = 118/207 (57%), Positives = 157/207 (75%), Gaps = 2/207 (0%)
 Frame = +3

Query: 81  LSSLRTGVQGLWRISSRSIQTTASRQH--DSLFVHRDTPEDNPSIPFEFSQANQKRVEAL 254
           L +   G+   W    R++  T  +     +LFVHRDTPE+NP  PF+F+  N KR+EA+
Sbjct: 7   LRARAAGLTAHWGRHVRNLHKTVMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66

Query: 255 LAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 434
           +  YPEGHK  A++P+LDLAQRQ+G WLPISAM+KVAE+L +P MRVYEVATFYTM+ R+
Sbjct: 67  VKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRK 125

Query: 435 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPM 614
           P+GKYH+QVCTTTPC LR SD+IL AI+++   +VG  +P   F++ EVECLGACVNAPM
Sbjct: 126 PVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPM 185

Query: 615 IQVNDDYYEDLSVEDTKEIISQXKEGR 695
           +Q+ND+YYEDL+ +D +EII + K G+
Sbjct: 186 VQINDNYYEDLTAKDIEEIIDELKAGK 212


>BC001632-1|AAH01632.1|  249|Homo sapiens NADH dehydrogenase
           (ubiquinone) flavoprotein 2, 24kDa protein.
          Length = 249

 Score =  259 bits (634), Expect = 8e-69
 Identities = 118/207 (57%), Positives = 157/207 (75%), Gaps = 2/207 (0%)
 Frame = +3

Query: 81  LSSLRTGVQGLWRISSRSIQTTASRQH--DSLFVHRDTPEDNPSIPFEFSQANQKRVEAL 254
           L +   G+   W    R++  T  +     +LFVHRDTPE+NP  PF+F+  N KR+EA+
Sbjct: 7   LRARAAGLTAHWGRHVRNLHKTVMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66

Query: 255 LAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 434
           +  YPEGHK  A++P+LDLAQRQ+G WLPISAM+KVAE+L +P MRVYEVATFYTM+ R+
Sbjct: 67  VKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRK 125

Query: 435 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPM 614
           P+GKYH+QVCTTTPC LR SD+IL AI+++   +VG  +P   F++ EVECLGACVNAPM
Sbjct: 126 PVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPM 185

Query: 615 IQVNDDYYEDLSVEDTKEIISQXKEGR 695
           +Q+ND+YYEDL+ +D +EII + K G+
Sbjct: 186 VQINDNYYEDLTAKDIEEIIDELKAGK 212


>D88548-1|BAA25988.1|  231|Homo sapiens 24-kDa subunit of complex I
           protein.
          Length = 231

 Score =  255 bits (625), Expect = 1e-67
 Identities = 112/177 (63%), Positives = 147/177 (83%)
 Frame = +3

Query: 165 SLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPI 344
           +LFVHRDTPE+NP  PF+F+  N KR+EA++  YPEGHK  A++P+LDLAQRQ+G WLPI
Sbjct: 19  ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPI 77

Query: 345 SAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQE 524
           SAM+KVAE+L +P MRVYEVATFYTM+ R+P+GKY++QVCTTTPC LR SD+IL AI+++
Sbjct: 78  SAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYYIQVCTTTPCMLRNSDSILEAIQKK 137

Query: 525 TNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISQXKEGR 695
              +VG  +P   F++ EVECLGACVNAPM+Q+ND+YYEDL+ +D +EII + K G+
Sbjct: 138 LGIKVGETTPDKLFTLIEVECLGACVNAPMVQINDNYYEDLTAKDIEEIIDELKAGK 194


>X95653-1|CAA64955.1|  746|Homo sapiens enhancer of zeste protein.
          Length = 746

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 1/129 (0%)
 Frame = +3

Query: 177 HRDTPEDNPSIPFEFSQANQKRVEALLAIYPE-GHKRGAMIPLLDLAQRQSGGWLPISAM 353
           HRD  E  P  P +F   + K +EA+ +++P+ G          +L ++Q  G LP    
Sbjct: 206 HRDDKESRP--PRKFP--SDKILEAISSMFPDKGTAEELKEKYKELTEQQLPGALPPECT 261

Query: 354 HKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNC 533
             +         R   + +F+T+F RR         C    C+L    A  N  K++   
Sbjct: 262 PNIDGPNAKSVQREQSLHSFHTLFCRR---------CFKYDCFLHPFHATPNTYKRKNTE 312

Query: 534 EVGGNSPCG 560
               N PCG
Sbjct: 313 TALDNKPCG 321


>U61145-1|AAC51520.1|  746|Homo sapiens enhancer of zeste homolog 2
           protein.
          Length = 746

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 1/129 (0%)
 Frame = +3

Query: 177 HRDTPEDNPSIPFEFSQANQKRVEALLAIYPE-GHKRGAMIPLLDLAQRQSGGWLPISAM 353
           HRD  E  P  P +F   + K  EA+ +++P+ G          +L ++Q  G LP    
Sbjct: 206 HRDDKESRP--PRKFP--SDKIFEAISSMFPDKGTAEELKEKYKELTEQQLPGALPPECT 261

Query: 354 HKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNC 533
             +         R   + +F+T+F RR         C    C+L    A  N  K++   
Sbjct: 262 PNIDGPNAKSVQREQSLHSFHTLFCRR---------CFKYDCFLHPFHATPNTYKRKNTE 312

Query: 534 EVGGNSPCG 560
               N PCG
Sbjct: 313 TALDNKPCG 321


>U52965-1|AAC50591.1|  613|Homo sapiens ENX-1 protein.
          Length = 613

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 1/129 (0%)
 Frame = +3

Query: 177 HRDTPEDNPSIPFEFSQANQKRVEALLAIYPE-GHKRGAMIPLLDLAQRQSGGWLPISAM 353
           HRD  E  P  P +F   + K  EA+ +++P+ G          +L ++Q  G LP    
Sbjct: 73  HRDDKESRP--PRKFP--SDKIFEAISSMFPDKGTAEELKEKYKELTEQQLPGALPPECT 128

Query: 354 HKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNC 533
             +         R   + +F+T+F RR         C    C+L    A  N  K++   
Sbjct: 129 PNIDGPNAKSVQREQSLHSFHTLFCRR---------CFKYDCFLHPFHATPNTYKRKNTE 179

Query: 534 EVGGNSPCG 560
               N PCG
Sbjct: 180 TALDNKPCG 188


>AC006323-2|AAS02035.1|  664|Homo sapiens unknown protein.
          Length = 664

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 1/129 (0%)
 Frame = +3

Query: 177 HRDTPEDNPSIPFEFSQANQKRVEALLAIYPE-GHKRGAMIPLLDLAQRQSGGWLPISAM 353
           HRD  E  P  P +F   + K  EA+ +++P+ G          +L ++Q  G LP    
Sbjct: 124 HRDDKESRP--PRKFP--SDKIFEAISSMFPDKGTAEELKEKYKELTEQQLPGALPPECT 179

Query: 354 HKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNC 533
             +         R   + +F+T+F RR         C    C+L    A  N  K++   
Sbjct: 180 PNIDGPNAKSVQREQSLHSFHTLFCRR---------CFKYDCFLHPFHATPNTYKRKNTE 230

Query: 534 EVGGNSPCG 560
               N PCG
Sbjct: 231 TALDNKPCG 239


>AB208895-1|BAD92132.1|  376|Homo sapiens Enhancer of zeste homolog
           2 variant protein.
          Length = 376

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 1/129 (0%)
 Frame = +3

Query: 177 HRDTPEDNPSIPFEFSQANQKRVEALLAIYPE-GHKRGAMIPLLDLAQRQSGGWLPISAM 353
           HRD  E  P  P +F   + K  EA+ +++P+ G          +L ++Q  G LP    
Sbjct: 248 HRDDKESRP--PRKFP--SDKIFEAISSMFPDKGTAEELKEKYKELTEQQLPGALPPECT 303

Query: 354 HKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNC 533
             +         R   + +F+T+F RR         C    C+L    A  N  K++   
Sbjct: 304 PNIDGPNAKSVQREQSLHSFHTLFCRR---------CFKYDCFLHPFHATPNTYKRKNTE 354

Query: 534 EVGGNSPCG 560
               N PCG
Sbjct: 355 TALDNKPCG 363


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,407,138
Number of Sequences: 237096
Number of extensions: 2449101
Number of successful extensions: 12811
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12805
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -