Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25d03
         (717 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075322-1|AAL68189.2|  269|Drosophila melanogaster GH08937p pro...   296   2e-80
AE014298-2589|AAF48745.1|  242|Drosophila melanogaster CG5703-PA...   295   4e-80
AY089390-1|AAL90128.1|  238|Drosophila melanogaster AT21479p pro...   175   5e-44
AE014296-2883|AAF49361.1|  238|Drosophila melanogaster CG6485-PA...   175   5e-44
AY061479-1|AAL29027.1|  546|Drosophila melanogaster LD44506p pro...    31   2.1  
AE014297-2927|AAF55847.2|  546|Drosophila melanogaster CG5745-PA...    31   2.1  
BT024356-1|ABC86418.1|  317|Drosophila melanogaster IP08469p pro...    29   4.8  
AE013599-143|AAF57283.2|  246|Drosophila melanogaster CG7849-PA,...    29   4.8  
AE013599-142|AAM68342.1|  317|Drosophila melanogaster CG7849-PB,...    29   4.8  

>AY075322-1|AAL68189.2|  269|Drosophila melanogaster GH08937p
           protein.
          Length = 269

 Score =  296 bits (726), Expect = 2e-80
 Identities = 135/204 (66%), Positives = 166/204 (81%)
 Frame = +3

Query: 75  KMLSSLRTGVQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEAL 254
           +ML++  +      R + R+I T+++R  D+LFVHRDTPEDNP+IPFEF+  N+KRVEA+
Sbjct: 27  RMLTNCASKTLAAVRANIRAIATSSARASDNLFVHRDTPEDNPNIPFEFTAENKKRVEAI 86

Query: 255 LAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 434
           L+IYPEGHKRGAMIPLLDLAQRQ G WLPISAMHKVAEIL LP MRVYEVATFYTMF+R+
Sbjct: 87  LSIYPEGHKRGAMIPLLDLAQRQYG-WLPISAMHKVAEILQLPNMRVYEVATFYTMFMRK 145

Query: 435 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPM 614
           P GKYH+QVCTTTPCWLRGSD IL   K++    VG  +   KF++SEVECLGACVNAPM
Sbjct: 146 PTGKYHIQVCTTTPCWLRGSDDILETCKKQLGIGVGDTTKDRKFTISEVECLGACVNAPM 205

Query: 615 IQVNDDYYEDLSVEDTKEIISQXK 686
           + +NDDYYEDL+ +D ++I++  K
Sbjct: 206 VAINDDYYEDLTSKDMQDILNDLK 229


>AE014298-2589|AAF48745.1|  242|Drosophila melanogaster CG5703-PA
           protein.
          Length = 242

 Score =  295 bits (724), Expect = 4e-80
 Identities = 135/203 (66%), Positives = 165/203 (81%)
 Frame = +3

Query: 78  MLSSLRTGVQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEALL 257
           ML++  +      R + R+I T+++R  D+LFVHRDTPEDNP+IPFEF+  N+KRVEA+L
Sbjct: 1   MLTNCASKTLAAVRANIRAIATSSARASDNLFVHRDTPEDNPNIPFEFTAENKKRVEAIL 60

Query: 258 AIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRP 437
           +IYPEGHKRGAMIPLLDLAQRQ G WLPISAMHKVAEIL LP MRVYEVATFYTMF+R+P
Sbjct: 61  SIYPEGHKRGAMIPLLDLAQRQYG-WLPISAMHKVAEILQLPNMRVYEVATFYTMFMRKP 119

Query: 438 IGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMI 617
            GKYH+QVCTTTPCWLRGSD IL   K++    VG  +   KF++SEVECLGACVNAPM+
Sbjct: 120 TGKYHIQVCTTTPCWLRGSDDILETCKKQLGIGVGDTTKDRKFTISEVECLGACVNAPMV 179

Query: 618 QVNDDYYEDLSVEDTKEIISQXK 686
            +NDDYYEDL+ +D ++I++  K
Sbjct: 180 AINDDYYEDLTSKDMQDILNDLK 202


>AY089390-1|AAL90128.1|  238|Drosophila melanogaster AT21479p
           protein.
          Length = 238

 Score =  175 bits (426), Expect = 5e-44
 Identities = 83/168 (49%), Positives = 112/168 (66%)
 Frame = +3

Query: 192 EDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEI 371
           E   ++ FEFS+ NQ+RV+ALLA YP+   +GA++PLLD+AQRQ G WL ISA+  VAE 
Sbjct: 27  EIRKALKFEFSKDNQRRVKALLAWYPQAEWKGALLPLLDIAQRQQG-WLSISAVQAVAET 85

Query: 372 LNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNS 551
           + +  M  +E A FYTMF  +P GKY V VCT+TPC LRG D I  A K+  N E G  +
Sbjct: 86  IKIDPMEAFEAAQFYTMFFMKPRGKYVVSVCTSTPCKLRGGDEIFEACKKTLNLEHGQTT 145

Query: 552 PCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISQXKEGR 695
           P  +F++ E  C+GACVNAP++ VNDD YEDL  +    I++  +  +
Sbjct: 146 PDMQFTLKEDYCMGACVNAPVLAVNDDMYEDLDEKSLANILADLRNDK 193


>AE014296-2883|AAF49361.1|  238|Drosophila melanogaster CG6485-PA
           protein.
          Length = 238

 Score =  175 bits (426), Expect = 5e-44
 Identities = 83/168 (49%), Positives = 112/168 (66%)
 Frame = +3

Query: 192 EDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEI 371
           E   ++ FEFS+ NQ+RV+ALLA YP+   +GA++PLLD+AQRQ G WL ISA+  VAE 
Sbjct: 27  EIRKALKFEFSKDNQRRVKALLAWYPQAEWKGALLPLLDIAQRQQG-WLSISAVQAVAET 85

Query: 372 LNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNS 551
           + +  M  +E A FYTMF  +P GKY V VCT+TPC LRG D I  A K+  N E G  +
Sbjct: 86  IKIDPMEAFEAAQFYTMFFMKPRGKYVVSVCTSTPCKLRGGDEIFEACKKTLNLEHGQTT 145

Query: 552 PCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISQXKEGR 695
           P  +F++ E  C+GACVNAP++ VNDD YEDL  +    I++  +  +
Sbjct: 146 PDMQFTLKEDYCMGACVNAPVLAVNDDMYEDLDEKSLANILADLRNDK 193


>AY061479-1|AAL29027.1|  546|Drosophila melanogaster LD44506p
           protein.
          Length = 546

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 21/67 (31%), Positives = 28/67 (41%)
 Frame = +3

Query: 78  MLSSLRTGVQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEALL 257
           +L S R G Q L     R      ++Q     +H D P  NP IP    Q  Q+  E +L
Sbjct: 273 VLESKRQGYQDLRHNYFRVDSQDETQQDTYRQIHIDVPRMNPQIPLFQQQLVQEMFERIL 332

Query: 258 AIYPEGH 278
            I+   H
Sbjct: 333 FIWAIRH 339


>AE014297-2927|AAF55847.2|  546|Drosophila melanogaster CG5745-PA
           protein.
          Length = 546

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 21/67 (31%), Positives = 28/67 (41%)
 Frame = +3

Query: 78  MLSSLRTGVQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEALL 257
           +L S R G Q L     R      ++Q     +H D P  NP IP    Q  Q+  E +L
Sbjct: 273 VLESKRQGYQDLRHNYFRVDSQDETQQDTYRQIHIDVPRMNPQIPLFQQQLVQEMFERIL 332

Query: 258 AIYPEGH 278
            I+   H
Sbjct: 333 FIWAIRH 339


>BT024356-1|ABC86418.1|  317|Drosophila melanogaster IP08469p
           protein.
          Length = 317

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -1

Query: 405 LLHKLSFLEDLRSQPPCA*LR*VASLHFVVVPDPVKESWHL 283
           L+H ++   DLR+   C+ LR V   HF V    ++ +WHL
Sbjct: 247 LVHDMAL--DLRTVAHCSQLRCVRHAHFDVTDSLLRHAWHL 285


>AE013599-143|AAF57283.2|  246|Drosophila melanogaster CG7849-PA,
           isoform A protein.
          Length = 246

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -1

Query: 405 LLHKLSFLEDLRSQPPCA*LR*VASLHFVVVPDPVKESWHL 283
           L+H ++   DLR+   C+ LR V   HF V    ++ +WHL
Sbjct: 176 LVHDMAL--DLRTVAHCSQLRCVRHAHFDVTDSLLRHAWHL 214


>AE013599-142|AAM68342.1|  317|Drosophila melanogaster CG7849-PB,
           isoform B protein.
          Length = 317

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -1

Query: 405 LLHKLSFLEDLRSQPPCA*LR*VASLHFVVVPDPVKESWHL 283
           L+H ++   DLR+   C+ LR V   HF V    ++ +WHL
Sbjct: 247 LVHDMAL--DLRTVAHCSQLRCVRHAHFDVTDSLLRHAWHL 285


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,007,021
Number of Sequences: 53049
Number of extensions: 735022
Number of successful extensions: 2175
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2171
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)