Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25d03
(717 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 3.8
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 22 5.0
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 5.0
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 5.0
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 5.0
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 5.0
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 5.0
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 6.7
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 8.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.8
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 8.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 8.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 8.8
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.6 bits (46), Expect = 3.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 341 R*PASTLSLCQIQ*RNHGTSLVTFRVNGQQSLYSLL 234
R P S L +++ N+G S R GQQ+ Y LL
Sbjct: 369 RAPNSETKLAEMR-DNYGISAGLNRTAGQQAAYQLL 403
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 22.2 bits (45), Expect = 5.0
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +3
Query: 468 TTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNA--PMIQVNDDYYE 641
T P W G A L I +TN GG+ + GAC +A +++ D +
Sbjct: 82 TVPRWRNGIPATLTYISLDTN--RGGSPKLTPYPNWAQNKAGACGSAITTAYRIHADSCD 139
Query: 642 DLSVEDTKEI 671
L V DT I
Sbjct: 140 RLWVLDTGTI 149
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 11 TNLFANSVSQYNFYSKLEYNQKNVIQ 88
++L N++ N Y KL+Y N I+
Sbjct: 305 SSLLNNTIHNNNNYKKLQYYNINYIE 330
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 11 TNLFANSVSQYNFYSKLEYNQKNVIQ 88
++L N++ N Y KL+Y N I+
Sbjct: 316 SSLLNNTIHNNNNYKKLQYYNINYIE 341
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 11 TNLFANSVSQYNFYSKLEYNQKNVIQ 88
++L N++ N Y KL+Y N I+
Sbjct: 316 SSLLNNTIHNNNNYKKLQYYNINYIE 341
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 11 TNLFANSVSQYNFYSKLEYNQKNVIQ 88
++L N++ N Y KL+Y N I+
Sbjct: 305 SSLLNNTIHNNNNYKKLQYYNINYIE 330
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 22.2 bits (45), Expect = 5.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 607 AFTQAPKHSTSETENLPQGLLPPTSQFVSCLI 512
AFTQA T E ++LP G F C++
Sbjct: 186 AFTQASLAMTREEKHLPIGASVLFEIFPFCIV 217
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 6.7
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +2
Query: 2 VSKTNLFANSVSQYNFYSKLEYNQKN 79
+S + N+ +YN+ +K YN N
Sbjct: 85 LSNKTIHNNNNYKYNYNNKYNYNNNN 110
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 129 RSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQK 239
RSI ++ R S+F D +++PSI S NQK
Sbjct: 379 RSIYSSLLRYPRSIFRQTDDHQNSPSI--FISDDNQK 413
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 8.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 35 SQYNFYSKLEYNQKNVIQ 88
+ YN Y KL YN N+ Q
Sbjct: 344 NNYNNYKKLYYNIINIEQ 361
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 8.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 339 VASLHFVVVPDPVKESW 289
+ +L ++ DPVKE W
Sbjct: 172 IGNLSHALLKDPVKEFW 188
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 8.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 339 VASLHFVVVPDPVKESW 289
+ +L ++ DPVKE W
Sbjct: 225 IGNLSHALLKDPVKEFW 241
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 8.8
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 501 ILNAIKQETNCEVGG 545
+LN + NCE+GG
Sbjct: 869 VLNGETRTINCEIGG 883
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,186
Number of Sequences: 438
Number of extensions: 4400
Number of successful extensions: 27
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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